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vHDvDB 2.0:乙型肝炎 Delta 病毒数据库和组比较服务器。

vHDvDB 2.0: Database and Group Comparison Server for Hepatitis Delta Virus.

机构信息

Department of Computer Science and Information Engineering, Chang Gung University, Taoyuan 33302, Taiwan.

Molecular Medicine Research Center, Chang Gung University, Taoyuan 333, Taiwan.

出版信息

Viruses. 2024 Aug 5;16(8):1254. doi: 10.3390/v16081254.

DOI:10.3390/v16081254
PMID:39205227
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11359145/
Abstract

The hepatitis delta virus (HDV) is a unique pathogen with significant global health implications, affecting individuals who are coinfected with the hepatitis B virus (HBV). HDV infection has profound clinical consequences, manifesting either as coinfection with HBV, resulting in acute hepatitis and potential liver failure, or as superinfection in chronic HBV cases, substantially increasing the risk of cirrhosis and hepatocellular carcinoma. Given the complex dynamics of HDV infection and the urgent need for advanced research tools, this article introduces vHDvDB 2.0, a comprehensive HDV full-length sequence database. This innovative platform integrates data preprocessing, secondary structure prediction, and epidemiological research tools. The primary goal of vHDvDB 2.0 is to consolidate HDV sequence data into a user-friendly repository, thereby facilitating access for researchers and enhancing the broader scientific understanding of HDV. The significance of this database lies in its potential to streamline HDV research by providing a centralized resource for analyzing viral sequences and exploring genotype-specific characteristics. It will also enable more in-depth research within the HDV sequence domains.

摘要

丁型肝炎病毒(HDV)是一种具有重要全球健康意义的独特病原体,影响同时感染乙型肝炎病毒(HBV)的个体。HDV 感染具有深远的临床后果,表现为与 HBV 同时感染,导致急性肝炎和潜在的肝功能衰竭,或在慢性 HBV 病例中发生重叠感染,大大增加肝硬化和肝细胞癌的风险。鉴于 HDV 感染的复杂动态和对先进研究工具的迫切需求,本文介绍了 vHDvDB 2.0,这是一个综合性的 HDV 全长序列数据库。这个创新平台集成了数据预处理、二级结构预测和流行病学研究工具。vHDvDB 2.0 的主要目标是将 HDV 序列数据整合到一个用户友好的存储库中,从而为研究人员提供便利,并增强对 HDV 的更广泛的科学理解。该数据库的意义在于,它通过为分析病毒序列和探索基因型特异性特征提供集中资源,能够简化 HDV 研究。它还将使 HDV 序列领域的研究更加深入。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/b134cc27d6b8/viruses-16-01254-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/8ece2b70000d/viruses-16-01254-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/91765f20028a/viruses-16-01254-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/0e30f12af52a/viruses-16-01254-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/e3c027b5c43d/viruses-16-01254-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/0ccb412103bc/viruses-16-01254-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/5684459de784/viruses-16-01254-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/4cac4c5566a6/viruses-16-01254-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/b134cc27d6b8/viruses-16-01254-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/8ece2b70000d/viruses-16-01254-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/91765f20028a/viruses-16-01254-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/0e30f12af52a/viruses-16-01254-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/e3c027b5c43d/viruses-16-01254-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/0ccb412103bc/viruses-16-01254-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/5684459de784/viruses-16-01254-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/4cac4c5566a6/viruses-16-01254-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b96b/11359145/b134cc27d6b8/viruses-16-01254-g008.jpg

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本文引用的文献

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Viruses. 2024 May 21;16(6):817. doi: 10.3390/v16060817.
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ICTV Virus Taxonomy Profile: 2024.ICTV 病毒分类学简介:2024 年
J Gen Virol. 2024 Feb;105(2). doi: 10.1099/jgv.0.001963.
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A Mathematical Analysis of HDV Genotypes: From Molecules to Cells.丁型肝炎病毒基因型的数学分析:从分子到细胞
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HDVdb: A Comprehensive Hepatitis D Virus Database.HDVdb:一个综合性的丁型肝炎病毒数据库。
Viruses. 2020 May 14;12(5):538. doi: 10.3390/v12050538.
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The global prevalence of hepatitis D virus infection: Systematic review and meta-analysis.全球丁型肝炎病毒感染的流行情况:系统评价和荟萃分析。
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Targeting the Host for New Therapeutic Perspectives in Hepatitis D.以宿主为靶点探索丁型肝炎治疗新前景
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