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大规模尖峰网络模型到神经元群体活动的自动化定制。

Automated customization of large-scale spiking network models to neuronal population activity.

机构信息

Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.

Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA, USA.

出版信息

Nat Comput Sci. 2024 Sep;4(9):690-705. doi: 10.1038/s43588-024-00688-3. Epub 2024 Sep 16.

DOI:10.1038/s43588-024-00688-3
PMID:39285002
Abstract

Understanding brain function is facilitated by constructing computational models that accurately reproduce aspects of brain activity. Networks of spiking neurons capture the underlying biophysics of neuronal circuits, yet their activity's dependence on model parameters is notoriously complex. As a result, heuristic methods have been used to configure spiking network models, which can lead to an inability to discover activity regimes complex enough to match large-scale neuronal recordings. Here we propose an automatic procedure, Spiking Network Optimization using Population Statistics (SNOPS), to customize spiking network models that reproduce the population-wide covariability of large-scale neuronal recordings. We first confirmed that SNOPS accurately recovers simulated neural activity statistics. Then, we applied SNOPS to recordings in macaque visual and prefrontal cortices and discovered previously unknown limitations of spiking network models. Taken together, SNOPS can guide the development of network models, thereby enabling deeper insight into how networks of neurons give rise to brain function.

摘要

理解大脑功能可以通过构建能够准确再现大脑活动某些方面的计算模型来实现。尖峰神经元网络可以捕捉神经元回路的潜在生物物理学特性,但其活动对模型参数的依赖性却非常复杂。因此,人们已经使用启发式方法来配置尖峰网络模型,这可能导致无法发现足够复杂的活动状态来匹配大规模神经元记录。在这里,我们提出了一种自动程序,即使用群体统计数据的尖峰网络优化(SNOPS),用于定制能够再现大规模神经元记录的群体范围可变性的尖峰网络模型。我们首先确认 SNOPS 可以准确地恢复模拟神经活动的统计数据。然后,我们将 SNOPS 应用于猕猴视觉和前额叶皮层的记录,并发现了尖峰网络模型以前未知的局限性。总之,SNOPS 可以指导网络模型的开发,从而使我们能够更深入地了解神经元网络如何产生大脑功能。

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本文引用的文献

1
The centrality of population-level factors to network computation is demonstrated by a versatile approach for training spiking networks.人口水平因素在网络计算中的核心地位,通过一种通用的训练尖峰网络的方法得到了证明。
Neuron. 2023 Mar 1;111(5):631-649.e10. doi: 10.1016/j.neuron.2022.12.007. Epub 2023 Jan 10.
2
Theory of the Multiregional Neocortex: Large-Scale Neural Dynamics and Distributed Cognition.理论的多区域新皮质:大规模的神经动力学和分布式认知。
Annu Rev Neurosci. 2022 Jul 8;45:533-560. doi: 10.1146/annurev-neuro-110920-035434.
3
A Stable Population Code for Attention in Prefrontal Cortex Leads a Dynamic Attention Code in Visual Cortex.
前额皮质注意的稳定种群代码引领视觉皮质的动态注意代码。
J Neurosci. 2021 Nov 3;41(44):9163-9176. doi: 10.1523/JNEUROSCI.0608-21.2021. Epub 2021 Sep 28.
4
Interrogating theoretical models of neural computation with emergent property inference.用涌现属性推理方法对神经计算的理论模型进行探究。
Elife. 2021 Jul 29;10:e56265. doi: 10.7554/eLife.56265.
5
Bridging neuronal correlations and dimensionality reduction.桥接神经元相关性和降维。
Neuron. 2021 Sep 1;109(17):2740-2754.e12. doi: 10.1016/j.neuron.2021.06.028. Epub 2021 Jul 21.
6
Training deep neural density estimators to identify mechanistic models of neural dynamics.训练深度神经网络密度估计器以识别神经动力学的机制模型。
Elife. 2020 Sep 17;9:e56261. doi: 10.7554/eLife.56261.
7
Systematic Integration of Structural and Functional Data into Multi-scale Models of Mouse Primary Visual Cortex.系统整合结构和功能数据到鼠初级视觉皮层的多尺度模型中。
Neuron. 2020 May 6;106(3):388-403.e18. doi: 10.1016/j.neuron.2020.01.040. Epub 2020 Mar 5.
8
Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity.递归尖峰网络中的维度:活动的全局趋势和连接中的局部起源。
PLoS Comput Biol. 2019 Jul 12;15(7):e1006446. doi: 10.1371/journal.pcbi.1006446. eCollection 2019 Jul.
9
Computational Neuroscience: Mathematical and Statistical Perspectives.计算神经科学:数学与统计视角
Annu Rev Stat Appl. 2018 Mar;5:183-214. doi: 10.1146/annurev-statistics-041715-033733. Epub 2017 Dec 8.
10
Bridging large-scale neuronal recordings and large-scale network models using dimensionality reduction.使用降维技术将大规模神经元记录和大规模网络模型联系起来。
Curr Opin Neurobiol. 2019 Apr;55:40-47. doi: 10.1016/j.conb.2018.12.009. Epub 2019 Jan 22.