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CdiA 毒素释放的自蛋白水解机制重建。

Autoproteolytic mechanism of CdiA toxin release reconstituted .

机构信息

Department of Chemistry, The College of the Holy Cross, Worcester, Massachusetts, USA.

Mass Spectrometry Core Facility, Institute of Applied Life Sciences, University of Massachusetts, Amherst, Massachusetts, USA.

出版信息

J Bacteriol. 2024 Oct 24;206(10):e0024924. doi: 10.1128/jb.00249-24. Epub 2024 Sep 30.

Abstract

UNLABELLED

Contact-dependent inhibition (CDI) is a mechanism of interbacterial competition in Gram-negative bacteria. Bacteria that contain CDI systems produce a large, filamentous protein, CdiA, on their cell surfaces. CdiA contains a C-terminal toxin domain that is transported across the outer membranes (OMs) of neighboring bacteria. Once inside a target bacterium, the toxin is released from the CdiA protein via a proteolytic mechanism that has not been well characterized. We have developed an assay to monitor this toxin release process and have identified several conserved amino acids that play critical roles in the autocatalytic mechanism. Our results indicate that a hydrophobic, membrane-like environment is required for CdiA to fold, and the proteolysis occurs through an asparagine cyclization mechanism. Our assay thus provides a starting point for analyzing the conformational state of the CdiA protein when it is inserted into a target cell's OM and engaged in transporting the toxin across that membrane.

IMPORTANCE

It is challenging to develop new antibiotics capable of killing Gram-negative bacteria because their outer membranes are impermeable to many small molecules. Some Gram-negative bacteria, however, deliver much larger protein toxins through the outer membranes of competing bacteria in their environments using contact-dependent inhibition (CDI) systems. How these toxins traverse the outer membranes of their targets is not well understood. We have therefore developed a method to study the toxin delivery process in a highly simplified system using a fragment of a CDI protein. Our results indicate that the CDI protein assembles into a structure in the target membrane that catalyzes the release of the toxin. This CDI protein fragment enables further studies of the toxin delivery mechanism.

摘要

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接触依赖性抑制(CDI)是革兰氏阴性菌中细菌间竞争的一种机制。含有 CDI 系统的细菌在其细胞表面产生一种大型的、丝状的蛋白质 CdiA。CdiA 含有一个 C 端毒素结构域,该结构域通过一种尚未很好表征的蛋白水解机制穿过相邻细菌的外膜(OM)。一旦进入靶细菌,毒素就会通过一种蛋白水解机制从 CdiA 蛋白中释放出来,这种机制尚未得到很好的描述。我们开发了一种检测该毒素释放过程的方法,并鉴定出几个在自催化机制中起关键作用的保守氨基酸。我们的结果表明,CdiA 折叠需要一个疏水性的、类似膜的环境,而蛋白水解是通过天冬酰胺环化机制发生的。因此,我们的检测方法为分析 CdiA 蛋白在插入靶细胞 OM 并参与将毒素穿过该膜时的构象状态提供了一个起点。

重要性

开发能够杀死革兰氏阴性菌的新抗生素具有挑战性,因为它们的外膜对许多小分子是不可渗透的。然而,一些革兰氏阴性菌使用接触依赖性抑制(CDI)系统将更大的蛋白质毒素通过其环境中竞争细菌的外膜传递出去。这些毒素如何穿过靶细胞膜尚不清楚。因此,我们开发了一种使用 CDI 蛋白片段在高度简化的系统中研究毒素传递过程的方法。我们的结果表明,CDI 蛋白在靶膜中组装成一种结构,该结构催化毒素的释放。该 CDI 蛋白片段使进一步研究毒素传递机制成为可能。

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