• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

细菌接触依赖性生长抑制效应蛋白的功能与结构多样性

Functional and Structural Diversity of Bacterial Contact-Dependent Growth Inhibition Effectors.

作者信息

Cuthbert Bonnie J, Hayes Christopher S, Goulding Celia W

机构信息

Molecular Biology and Biochemistry, University of California, Irvine, Irvine, CA, United States.

Molecular, Cellular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA, United States.

出版信息

Front Mol Biosci. 2022 Apr 26;9:866854. doi: 10.3389/fmolb.2022.866854. eCollection 2022.

DOI:10.3389/fmolb.2022.866854
PMID:35558562
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9086364/
Abstract

Bacteria live in complex communities and environments, competing for space and nutrients. Within their niche habitats, bacteria have developed various inter-bacterial mechanisms to compete and communicate. One such mechanism is contact-dependent growth inhibition (CDI). CDI is found in many Gram-negative bacteria, including several pathogens. These CDI bacteria encode a CdiB/CdiA two-partner secretion system that delivers inhibitory toxins into neighboring cells upon contact. Toxin translocation results in the growth inhibition of closely related strains and provides a competitive advantage to the CDI bacteria. CdiB, an outer-membrane protein, secretes CdiA onto the surface of the CDI bacteria. When CdiA interacts with specific target-cell receptors, CdiA delivers its C-terminal toxin region (CdiA-CT) into the target-cell. CdiA-CT toxin proteins display a diverse range of toxic functions, such as DNase, RNase, or pore-forming toxin activity. CDI bacteria also encode an immunity protein, CdiI, that specifically binds and neutralizes its cognate CdiA-CT, protecting the CDI bacteria from auto-inhibition. In Gram-negative bacteria, toxin/immunity (CdiA-CT/CdiI) pairs have highly variable sequences and functions, with over 130 predicted divergent toxin/immunity complex families. In this review, we will discuss biochemical and structural advances made in the characterization of CDI. This review will focus on the diverse array of CDI toxin/immunity complex structures together with their distinct toxin functions. Additionally, we will discuss the most recent studies on target-cell recognition and toxin entry, along with the discovery of a new member of the CDI loci. Finally, we will offer insights into how these diverse toxin/immunity complexes could be harnessed to fight human diseases.

摘要

细菌生活在复杂的群落和环境中,争夺空间和营养物质。在其生态位栖息地内,细菌已发展出各种细菌间机制来进行竞争和交流。其中一种机制是接触依赖性生长抑制(CDI)。CDI存在于许多革兰氏阴性菌中,包括几种病原体。这些CDI细菌编码一种CdiB/CdiA双组分分泌系统,该系统在接触时将抑制性毒素传递到邻近细胞中。毒素易位导致密切相关菌株的生长受到抑制,并为CDI细菌提供竞争优势。CdiB是一种外膜蛋白,将CdiA分泌到CDI细菌的表面。当CdiA与特定的靶细胞受体相互作用时,CdiA将其C末端毒素区域(CdiA-CT)传递到靶细胞中。CdiA-CT毒素蛋白具有多种毒性功能,如DNA酶、RNA酶或成孔毒素活性。CDI细菌还编码一种免疫蛋白CdiI,它能特异性结合并中和其同源的CdiA-CT,保护CDI细菌免受自身抑制。在革兰氏阴性菌中,毒素/免疫(CdiA-CT/CdiI)对具有高度可变的序列和功能,预测有超过130个不同的毒素/免疫复合物家族。在本综述中,我们将讨论在CDI表征方面取得的生化和结构进展。本综述将重点关注各种CDI毒素/免疫复合物结构及其独特的毒素功能。此外,我们将讨论关于靶细胞识别和毒素进入的最新研究,以及CDI基因座新成员 的发现。最后,我们将深入探讨如何利用这些多样的毒素/免疫复合物来对抗人类疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/6765b461493f/fmolb-09-866854-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/80455c0152de/fmolb-09-866854-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/dc543f9a4f62/fmolb-09-866854-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/c20346063488/fmolb-09-866854-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/5bf76dd8a43a/fmolb-09-866854-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/6765b461493f/fmolb-09-866854-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/80455c0152de/fmolb-09-866854-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/dc543f9a4f62/fmolb-09-866854-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/c20346063488/fmolb-09-866854-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/5bf76dd8a43a/fmolb-09-866854-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8d7/9086364/6765b461493f/fmolb-09-866854-g005.jpg

相似文献

1
Functional and Structural Diversity of Bacterial Contact-Dependent Growth Inhibition Effectors.细菌接触依赖性生长抑制效应蛋白的功能与结构多样性
Front Mol Biosci. 2022 Apr 26;9:866854. doi: 10.3389/fmolb.2022.866854. eCollection 2022.
2
Contact-Dependent Growth Inhibition (CDI) and CdiB/CdiA Two-Partner Secretion Proteins.接触依赖性生长抑制(CDI)与CdiB/CdiA双组分分泌蛋白
J Mol Biol. 2015 Nov 20;427(23):3754-65. doi: 10.1016/j.jmb.2015.09.010. Epub 2015 Sep 24.
3
A widespread family of polymorphic contact-dependent toxin delivery systems in bacteria.细菌中广泛存在的一类多态接触依赖性毒素输送系统家族。
Nature. 2010 Nov 18;468(7322):439-42. doi: 10.1038/nature09490.
4
Identification of functional toxin/immunity genes linked to contact-dependent growth inhibition (CDI) and rearrangement hotspot (Rhs) systems.鉴定与接触依赖性生长抑制 (CDI) 和重排热点 (Rhs) 系统相关的功能毒素/免疫基因。
PLoS Genet. 2011 Aug;7(8):e1002217. doi: 10.1371/journal.pgen.1002217. Epub 2011 Aug 4.
5
Diversification of β-Augmentation Interactions between CDI Toxin/Immunity Proteins.CDI毒素/免疫蛋白之间β-增强相互作用的多样化
J Mol Biol. 2015 Nov 20;427(23):3766-84. doi: 10.1016/j.jmb.2015.09.020. Epub 2015 Oct 9.
6
Mechanisms and biological roles of contact-dependent growth inhibition systems.接触依赖性生长抑制系统的机制及生物学作用。
Cold Spring Harb Perspect Med. 2014 Feb 1;4(2):a010025. doi: 10.1101/cshperspect.a010025.
7
Toxin on a stick: modular CDI toxin delivery systems play roles in bacterial competition.棍状毒素:模块化细胞分裂素自传递系统在细菌竞争中发挥作用。
Virulence. 2011 Jul-Aug;2(4):356-9. doi: 10.4161/viru.2.4.16463. Epub 2011 Jul 1.
8
Functional Diversity of Cytotoxic tRNase/Immunity Protein Complexes from Burkholderia pseudomallei.来自类鼻疽伯克霍尔德菌的细胞毒性tRNase/免疫蛋白复合物的功能多样性
J Biol Chem. 2016 Sep 9;291(37):19387-400. doi: 10.1074/jbc.M116.736074. Epub 2016 Jul 20.
9
The structure of a contact-dependent growth-inhibition (CDI) immunity protein from Neisseria meningitidis MC58.来自脑膜炎奈瑟菌MC58的接触依赖性生长抑制(CDI)免疫蛋白的结构
Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):702-9. doi: 10.1107/S2053230X15006585. Epub 2015 May 20.
10
Contact-dependent growth inhibition toxins exploit multiple independent cell-entry pathways.接触依赖性生长抑制毒素利用多种独立的细胞进入途径。
Proc Natl Acad Sci U S A. 2015 Sep 8;112(36):11341-6. doi: 10.1073/pnas.1512124112. Epub 2015 Aug 24.

引用本文的文献

1
Autoproteolytic mechanism of CdiA toxin release reconstituted .CdiA 毒素释放的自蛋白水解机制重建。
J Bacteriol. 2024 Oct 24;206(10):e0024924. doi: 10.1128/jb.00249-24. Epub 2024 Sep 30.
2
Mechanism of activation of contact-dependent growth inhibition tRNase toxin by the amino acid biogenesis factor CysK in the bacterial competition system.细菌竞争系统中氨基酸生物合成因子CysK激活接触依赖性生长抑制tRNase毒素的机制。
Nucleic Acids Res. 2025 Jan 7;53(1). doi: 10.1093/nar/gkae735.
3
Pangenome Analysis Reveals Novel Contact-Dependent Growth Inhibition System and Phenazine Biosynthesis Operons in BL95 That Are Located in An Integrative and Conjugative Element.

本文引用的文献

1
Lipidation of Class IV CdiA Effector Proteins Promotes Target Cell Recognition during Contact-Dependent Growth Inhibition.IV 类 CdiA 效应蛋白的脂化促进接触依赖性生长抑制过程中靶细胞的识别。
mBio. 2021 Oct 26;12(5):e0253021. doi: 10.1128/mBio.02530-21. Epub 2021 Oct 12.
2
Genetic Evidence for SecY Translocon-Mediated Import of Two Contact-Dependent Growth Inhibition (CDI) Toxins.遗传证据表明 SecY 易位子介导两种依赖接触生长抑制(CDI)毒素的导入。
mBio. 2021 Feb 2;12(1):e03367-20. doi: 10.1128/mBio.03367-20.
3
Role of Recipient Susceptibility Factors During Contact-Dependent Interbacterial Competition.
泛基因组分析揭示了BL95中位于整合性接合元件上的新型接触依赖性生长抑制系统和吩嗪生物合成操纵子。
Microorganisms. 2024 Jun 28;12(7):1321. doi: 10.3390/microorganisms12071321.
4
The type II secretion system as an underappreciated and understudied mediator of interbacterial antagonism.II 型分泌系统作为一种被低估和研究不足的细菌间拮抗作用的中介。
Infect Immun. 2024 Aug 13;92(8):e0020724. doi: 10.1128/iai.00207-24. Epub 2024 Jul 9.
5
Friend or Foe: Protein Inhibitors of DNA Gyrase.敌友难辨:DNA促旋酶的蛋白质抑制剂
Biology (Basel). 2024 Jan 29;13(2):84. doi: 10.3390/biology13020084.
6
The Love and Hate Relationship between T5SS and Other Secretion Systems in Bacteria.细菌中 T5SS 与其他分泌系统之间的爱恨情仇。
Int J Mol Sci. 2023 Dec 24;25(1):281. doi: 10.3390/ijms25010281.
7
Pathogenicity assessment of Shiga toxin-producing strains isolated from wild birds in a major agricultural region in California.从加利福尼亚一个主要农业地区的野生鸟类中分离出的产志贺毒素菌株的致病性评估。
Front Microbiol. 2023 Sep 26;14:1214081. doi: 10.3389/fmicb.2023.1214081. eCollection 2023.
8
Effectiveness of Pseudomonas aeruginosa type VI secretion system relies on toxin potency and type IV pili-dependent interaction.铜绿假单胞菌型 VI 分泌系统的有效性依赖于毒素效力和依赖 IV 型菌毛的相互作用。
PLoS Pathog. 2023 May 30;19(5):e1011428. doi: 10.1371/journal.ppat.1011428. eCollection 2023 May.
受体易感性因素在接触依赖性细菌间竞争中的作用
Front Microbiol. 2020 Nov 12;11:603652. doi: 10.3389/fmicb.2020.603652. eCollection 2020.
4
Structural insight into toxin secretion by contact-dependent growth inhibition transporters.接触依赖性生长抑制转运蛋白介导毒素分泌的结构解析
Elife. 2020 Oct 22;9:e58100. doi: 10.7554/eLife.58100.
5
Identification of A Putative T6SS Immunity Islet in Salmonella Typhi.伤寒沙门氏菌中一个假定的VI型分泌系统免疫岛的鉴定
Pathogens. 2020 Jul 11;9(7):559. doi: 10.3390/pathogens9070559.
6
Contact-Dependent Interbacterial Antagonism Mediated by Protein Secretion Machines.依赖接触的细菌间拮抗作用由蛋白质分泌机器介导。
Trends Microbiol. 2020 May;28(5):387-400. doi: 10.1016/j.tim.2020.01.003. Epub 2020 Feb 12.
7
A comparative genomics approach identifies contact-dependent growth inhibition as a virulence determinant.一种比较基因组学方法将依赖接触的生长抑制鉴定为一种毒力决定因素。
Proc Natl Acad Sci U S A. 2020 Mar 24;117(12):6811-6821. doi: 10.1073/pnas.1919198117. Epub 2020 Mar 10.
8
Identification of a Contact-Dependent Growth Inhibition (CDI) System That Reduces Biofilm Formation and Host Cell Adhesion of DSM30011 Strain.鉴定一种可减少DSM30011菌株生物膜形成和宿主细胞粘附的接触依赖性生长抑制(CDI)系统。
Front Microbiol. 2019 Oct 30;10:2450. doi: 10.3389/fmicb.2019.02450. eCollection 2019.
9
Exploiting yoeB-yefM toxin-antitoxin system of Streptococcus pneumoniae on the selective killing of miR-21 overexpressing breast cancer cell line (MCF-7).利用肺炎链球菌 yoeB-yefM 毒素-抗毒素系统选择性杀伤 miR-21 过表达的乳腺癌细胞系(MCF-7)。
J Cell Physiol. 2020 Mar;235(3):2925-2936. doi: 10.1002/jcp.29198. Epub 2019 Sep 20.
10
Convergent Evolution of the Barnase/EndoU/Colicin/RelE (BECR) Fold in Antibacterial tRNase Toxins.抗菌 tRNA 酶毒素中 Barnase/EndoU/Colicin/RelE(BECR)折叠的趋同进化。
Structure. 2019 Nov 5;27(11):1660-1674.e5. doi: 10.1016/j.str.2019.08.010. Epub 2019 Sep 9.