Department of Oncology, The Second Affiliated Hospital, Guizhou Medical University, Kaili, China.
Department of Radiation Oncology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
J Transl Med. 2024 Oct 4;22(1):896. doi: 10.1186/s12967-024-05708-4.
Concurrent chemoradiotherapy (CCRT) is a crucial treatment for non-small cell lung carcinoma (NSCLC). However, the use of deep learning (DL) models for predicting the response to CCRT in NSCLC remains unexplored. Therefore, we constructed a DL model for estimating the response to CCRT in NSCLC and explored the associated biological signaling pathways.
Overall, 229 patients with NSCLC were recruited from six hospitals. Based on contrast-enhanced computed tomography (CT) images, a three-dimensional ResNet50 algorithm was used to develop a model and validate the performance in predicting response and prognosis. An associated analysis was conducted on CT image visualization, RNA sequencing, and single-cell sequencing.
The DL model exhibited favorable predictive performance, with an area under the curve of 0.86 (95% confidence interval [CI] 0.79-0·92) in the training cohort and 0.84 (95% CI 0.75-0.94) in the validation cohort. The DL model (low score vs. high score) was an independent predictive factor; it was significantly associated with progression-free survival and overall survival in both the training (hazard ratio [HR] = 0.54 [0.36-0.80], P = 0.002; 0.44 [0.28-0.68], P < 0.001) and validation cohorts (HR = 0.46 [0.24-0.88], P = 0.008; 0.30 [0.14-0.60], P < 0.001). The DL model was also positively related to the cell adhesion molecules, the P53 signaling pathway, and natural killer cell-mediated cytotoxicity. Single-cell analysis revealed that differentially expressed genes were enriched in different immune cells.
The DL model demonstrated a strong predictive ability for determining the response in patients with NSCLC undergoing CCRT. Our findings contribute to understanding the potential biological mechanisms underlying treatment responses in these patients.
同步放化疗(CCRT)是治疗非小细胞肺癌(NSCLC)的重要手段。然而,深度学习(DL)模型在预测 NSCLC 对 CCRT 的反应方面的应用仍有待探索。因此,我们构建了一个用于估计 NSCLC 对 CCRT 反应的 DL 模型,并探讨了相关的生物学信号通路。
共纳入来自 6 家医院的 229 名 NSCLC 患者。基于增强 CT 图像,使用三维 ResNet50 算法构建模型并验证其在预测反应和预后方面的性能。对 CT 图像可视化、RNA 测序和单细胞测序进行相关分析。
DL 模型表现出良好的预测性能,在训练队列中的曲线下面积为 0.86(95%置信区间 0.79-0.92),在验证队列中的曲线下面积为 0.84(95%置信区间 0.75-0.94)。DL 模型(低评分与高评分)是一个独立的预测因素;它与训练队列中的无进展生存期和总生存期显著相关(风险比[HR]=0.54[0.36-0.80],P=0.002;0.44[0.28-0.68],P<0.001)和验证队列(HR=0.46[0.24-0.88],P=0.008;0.30[0.14-0.60],P<0.001)。DL 模型还与细胞黏附分子、P53 信号通路和自然杀伤细胞介导的细胞毒性呈正相关。单细胞分析显示,差异表达基因在不同免疫细胞中富集。
DL 模型对预测 NSCLC 患者接受 CCRT 后的反应具有较强的预测能力。我们的研究结果有助于了解这些患者治疗反应的潜在生物学机制。