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亲环蛋白基因及其抗活性的生物信息学分析

Bioinformatics Analysis of the Cyclophilin Gene and Its Anti- Activity.

作者信息

Zhao Yu, Lu Jiahong, Wang Yuming, Hao Kaiwen, Liu Zhimei, Hui Ge, Sun Tianxia

机构信息

Jilin Ginseng Academy, Changchun University of Chinese Medicine, Changchun 130117, China.

出版信息

Plants (Basel). 2024 Sep 29;13(19):2731. doi: 10.3390/plants13192731.

Abstract

In this paper, cyclophilin (PgCyP) was successfully obtained through a genetic engineering technique. A bioinformatics method was used to analyze the physicochemical properties and structure of . The results showed that belongs to the gene family. The protein encoded by the gene contains the active site of PPIase (R62, F67, and H133) and a binding site for A (W128). The relative molecular weight of PgCyP is 187.11 bp; its theoretical isoelectric point is 7.67, and it encodes 174 amino acids. The promoter region of mainly contains the low-temperature environmental stress response (LTR) element, abscisic acid-responsive cis-acting element (ABRE), and light-responsive cis-acting element (G-Box). includes a total of nine phosphorylation sites, comprising four serine phosphorylation sites, three threonine phosphorylation sites, and two tyrosine phosphorylation sites. was recombined and expressed in vitro, and its recombinant expression was investigated. Furthermore, it was found that the recombinant protein could effectively inhibit the germination of spores and the normal growth of mycelia in vitro. Further experiments on the roots of susceptible showed that the protein could improve the resistance of arabidopsis to . The findings of this study provide a basis for the use of the protein as a new type of green biopesticide.

摘要

在本文中,通过基因工程技术成功获得了亲环蛋白(PgCyP)。采用生物信息学方法分析了其理化性质和结构。结果表明,它属于该基因家族。该基因编码的蛋白质包含肽脯氨酰顺反异构酶(PPIase)的活性位点(R62、F67和H133)以及A的结合位点(W128)。PgCyP的相对分子质量为187.11 bp;其理论等电点为7.67,编码174个氨基酸。该基因的启动子区域主要包含低温环境胁迫响应(LTR)元件、脱落酸响应顺式作用元件(ABRE)和光响应顺式作用元件(G-Box)。它总共包含9个磷酸化位点,包括4个丝氨酸磷酸化位点、3个苏氨酸磷酸化位点和2个酪氨酸磷酸化位点。在体外进行了重组表达并对其重组表达进行了研究。此外,发现重组PgCyP蛋白能够在体外有效抑制孢子萌发和菌丝体的正常生长。对易感拟南芥根的进一步实验表明,PgCyP蛋白可以提高拟南芥对(病原体名称缺失)的抗性。本研究结果为将PgCyP蛋白用作新型绿色生物农药提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6ce/11478562/0c65db86178e/plants-13-02731-g001.jpg

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