• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种用于从LGE-MRI中进行左心房分割的具有增强边缘信息的新型网络。

A novel network with enhanced edge information for left atrium segmentation from LGE-MRI.

作者信息

Zhang Ze, Wang Zhen, Wang Xiqian, Wang Kuanquan, Yuan Yongfeng, Li Qince

机构信息

School of Computer Science and Technology, Harbin Institute of Technology, Harbin, China.

Department of Spinal Surgery, Zibo Central Hospital, Zibo, China.

出版信息

Front Physiol. 2024 Dec 10;15:1478347. doi: 10.3389/fphys.2024.1478347. eCollection 2024.

DOI:10.3389/fphys.2024.1478347
PMID:39720313
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11666555/
Abstract

INTRODUCTION

Automatic segmentation of the left atrium (LA) constitutes a crucial pre-processing step in evaluating heart structure and function during clinical interventions, such as image-guided radiofrequency ablation of atrial fibrillation. Despite prior research on LA segmentation, the low contrast in medical images exacerbates the challenge of distinguishing various tissues, rendering accurate boundary delineation of the target area formidable. Moreover, class imbalance due to the small target size further complicates segmentation.

METHODS

This study aims to devise an architecture that augments edge information for LA segmentation from late gadolinium enhancement magnetic resonance imaging. To intensify edge information within image features, this study introduces an Edge Information Enhancement Module (EIEM) to the foundational network. The design of EIEM is grounded in exploring edge details within target region features learned from images. Additionally, it incorporates a Spatially Weighted Cross-Entropy loss function tailored for EIEM, introducing constraints on different regions based on the importance of pixels to edge segmentation, while also mitigating class imbalance through weighted treatment of positive and negative samples.

RESULTS

The proposed method is validated on the 2018 Atrial Segmentation Challenge dataset. Compared with other state-of-the-art algorithms, the proposed algorithm demonstrated a significant improvement with an average symmetric surface distance of 0.684 mm and achieved a commendable Dice coefficient of 0.924, implicating the effectiveness of enhancing edge information.

DISCUSSION

The method offers a practical framework for precise LA localization and segmentation, particularly strengthening the algorithm's effectiveness in improving segmentation outcomes for irregular protrusions and discrete multiple targets. Additionally, the generalizability of our model was evaluated on the heart dataset from the Medical Segmentation Decathlon (MSD) challenge, confirming its robustness across different clinical scenarios involving LA segmentation.

摘要

引言

左心房(LA)的自动分割是临床干预(如图像引导下的房颤射频消融)中评估心脏结构和功能的关键预处理步骤。尽管之前已有关于LA分割的研究,但医学图像中的低对比度加剧了区分各种组织的挑战,使得准确勾勒目标区域的边界变得困难重重。此外,由于目标尺寸较小导致的类别不平衡进一步使分割变得复杂。

方法

本研究旨在设计一种架构,用于增强延迟钆增强磁共振成像中LA分割的边缘信息。为了强化图像特征中的边缘信息,本研究在基础网络中引入了边缘信息增强模块(EIEM)。EIEM的设计基于探索从图像中学习到的目标区域特征内的边缘细节。此外,它还结合了为EIEM量身定制的空间加权交叉熵损失函数,根据像素对边缘分割的重要性对不同区域引入约束,同时通过对正负样本的加权处理来缓解类别不平衡。

结果

所提出的方法在2018年心房分割挑战赛数据集上得到验证。与其他先进算法相比,所提出的算法表现出显著改进,平均对称表面距离为0.684毫米,获得了值得称赞的Dice系数0.924,这表明增强边缘信息是有效的。

讨论

该方法为精确的LA定位和分割提供了一个实用框架,尤其增强了算法在改善不规则突出和离散多个目标的分割结果方面的有效性。此外,我们在医学分割十项全能挑战赛(MSD)的心脏数据集上评估了模型的通用性,证实了其在涉及LA分割的不同临床场景中的稳健性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/2a5be4dd2e58/fphys-15-1478347-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/a18b054ddd28/fphys-15-1478347-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/c5e508366d3f/fphys-15-1478347-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/cc68e38453e6/fphys-15-1478347-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/e65691783d98/fphys-15-1478347-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/2a5be4dd2e58/fphys-15-1478347-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/a18b054ddd28/fphys-15-1478347-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/c5e508366d3f/fphys-15-1478347-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/cc68e38453e6/fphys-15-1478347-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/e65691783d98/fphys-15-1478347-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5693/11666555/2a5be4dd2e58/fphys-15-1478347-g005.jpg

相似文献

1
A novel network with enhanced edge information for left atrium segmentation from LGE-MRI.一种用于从LGE-MRI中进行左心房分割的具有增强边缘信息的新型网络。
Front Physiol. 2024 Dec 10;15:1478347. doi: 10.3389/fphys.2024.1478347. eCollection 2024.
2
Uncertainty-guided symmetric multilevel supervision network for 3D left atrium segmentation in late gadolinium-enhanced MRI.基于不确定性引导的对称多级监督网络的钆增强 MRI 晚期左心房分割。
Med Phys. 2022 Jul;49(7):4554-4565. doi: 10.1002/mp.15670. Epub 2022 Apr 29.
3
A global benchmark of algorithms for segmenting the left atrium from late gadolinium-enhanced cardiac magnetic resonance imaging.一种用于从晚期钆增强心脏磁共振成像中分割左心房的算法的全球基准。
Med Image Anal. 2021 Jan;67:101832. doi: 10.1016/j.media.2020.101832. Epub 2020 Oct 16.
4
Fully automatic segmentation of left atrium and pulmonary veins in late gadolinium-enhanced MRI: Towards objective atrial scar assessment.钆增强磁共振成像晚期左心房和肺静脉的全自动分割:迈向客观的心房瘢痕评估
J Magn Reson Imaging. 2016 Aug;44(2):346-54. doi: 10.1002/jmri.25148. Epub 2016 Jan 11.
5
Usformer: A small network for left atrium segmentation of 3D LGE MRI.Usformer:用于三维延迟增强磁共振成像左心房分割的小型网络。
Heliyon. 2024 Mar 28;10(7):e28539. doi: 10.1016/j.heliyon.2024.e28539. eCollection 2024 Apr 15.
6
LA-Net: A Multi-Task Deep Network for the Segmentation of the Left Atrium.LA-Net:用于左心房分割的多任务深度网络。
IEEE Trans Med Imaging. 2022 Feb;41(2):456-464. doi: 10.1109/TMI.2021.3117495. Epub 2022 Feb 2.
7
AtrialJSQnet: A New framework for joint segmentation and quantification of left atrium and scars incorporating spatial and shape information.心房 JSQnet:一种新的联合分割和量化左心房和疤痕的框架,结合了空间和形状信息。
Med Image Anal. 2022 Feb;76:102303. doi: 10.1016/j.media.2021.102303. Epub 2021 Nov 16.
8
A fully automated left atrium segmentation approach from late gadolinium enhanced magnetic resonance imaging based on a convolutional neural network.一种基于卷积神经网络的从延迟钆增强磁共振成像中进行全自动左心房分割的方法。
Quant Imaging Med Surg. 2020 Oct;10(10):1894-1907. doi: 10.21037/qims-20-168.
9
[Fully Automatic Glioma Segmentation Algorithm of Magnetic Resonance Imaging Based on 3D-UNet With More Global Contextual Feature Extraction: An Improvement on Insufficient Extraction of Global Features].基于具有更多全局上下文特征提取的3D-UNet的磁共振成像全自动胶质瘤分割算法:对全局特征提取不足的改进
Sichuan Da Xue Xue Bao Yi Xue Ban. 2024 Mar 20;55(2):447-454. doi: 10.12182/20240360208.
10
Deep learning architecture for 3D image super-resolution of late gadolinium enhanced cardiac MRI.用于延迟钆增强心脏磁共振成像3D图像超分辨率的深度学习架构。
J Med Imaging (Bellingham). 2023 Sep;10(5):051808. doi: 10.1117/1.JMI.10.5.051808. Epub 2023 May 24.

引用本文的文献

1
Comparative evaluation of deep learning architectures, including UNet, TransUNet, and MIST, for left atrium segmentation in cardiac computed tomography of congenital heart diseases.深度学习架构(包括UNet、TransUNet和MIST)在先天性心脏病心脏计算机断层扫描中左心房分割的比较评估
Ewha Med J. 2025 Apr;48(2):e33. doi: 10.12771/emj.2025.00087. Epub 2025 Apr 21.
2
Artificial Intelligence in Atrial Fibrillation: From Early Detection to Precision Therapy.心房颤动中的人工智能:从早期检测到精准治疗
J Clin Med. 2025 Apr 11;14(8):2627. doi: 10.3390/jcm14082627.

本文引用的文献

1
TMS-Net: A segmentation network coupled with a run-time quality control method for robust cardiac image segmentation.TMS-Net:一种结合运行时质量控制方法的分割网络,用于稳健的心脏图像分割。
Comput Biol Med. 2023 Jan;152:106422. doi: 10.1016/j.compbiomed.2022.106422. Epub 2022 Dec 14.
2
The Medical Segmentation Decathlon.医学分割十项全能
Nat Commun. 2022 Jul 15;13(1):4128. doi: 10.1038/s41467-022-30695-9.
3
GCW-UNet segmentation of cardiac magnetic resonance images for evaluation of left atrial enlargement.GCW-UNet 分割心脏磁共振图像用于评估左心房增大。
Comput Methods Programs Biomed. 2022 Jun;221:106915. doi: 10.1016/j.cmpb.2022.106915. Epub 2022 May 25.
4
Two-Stage Segmentation Framework Based on Distance Transformation.基于距离变换的两阶段分割框架。
Sensors (Basel). 2021 Dec 30;22(1):250. doi: 10.3390/s22010250.
5
LA-Net: A Multi-Task Deep Network for the Segmentation of the Left Atrium.LA-Net:用于左心房分割的多任务深度网络。
IEEE Trans Med Imaging. 2022 Feb;41(2):456-464. doi: 10.1109/TMI.2021.3117495. Epub 2022 Feb 2.
6
Fully Automated 3D Cardiac MRI Localisation and Segmentation Using Deep Neural Networks.使用深度神经网络的全自动3D心脏磁共振成像定位与分割
J Imaging. 2020 Jul 6;6(7):65. doi: 10.3390/jimaging6070065.
7
nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation.nnU-Net:一种基于深度学习的生物医学图像分割的自配置方法。
Nat Methods. 2021 Feb;18(2):203-211. doi: 10.1038/s41592-020-01008-z. Epub 2020 Dec 7.
8
A global benchmark of algorithms for segmenting the left atrium from late gadolinium-enhanced cardiac magnetic resonance imaging.一种用于从晚期钆增强心脏磁共振成像中分割左心房的算法的全球基准。
Med Image Anal. 2021 Jan;67:101832. doi: 10.1016/j.media.2020.101832. Epub 2020 Oct 16.
9
Simultaneous left atrium anatomy and scar segmentations via deep learning in multiview information with attention.基于注意力机制的多视图信息深度学习同步进行左心房解剖结构与瘢痕分割
Future Gener Comput Syst. 2020 Jun;107:215-228. doi: 10.1016/j.future.2020.02.005.
10
A robust computational framework for estimating 3D Bi-Atrial chamber wall thickness.一种用于估计 3D 双心房室壁厚度的强大计算框架。
Comput Biol Med. 2019 Nov;114:103444. doi: 10.1016/j.compbiomed.2019.103444. Epub 2019 Sep 12.