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中性粒细胞胞外诱捕网含有促进杀菌活性的活性脱氧核酶。

Neutrophil extracellular traps have active DNAzymes that promote bactericidal activity.

作者信息

Ku Ti-Hsuan, Ram-Mohan Nikhil, Zudock Elizabeth J, Abe Ryuichiro, Yang Samuel

机构信息

Department of Emergency Medicine, Stanford University, 240 Pasteur Drive Rm 0300 Stanford, CA 94305, USA.

出版信息

Nucleic Acids Res. 2025 Jan 24;53(3). doi: 10.1093/nar/gkae1262.

DOI:10.1093/nar/gkae1262
PMID:39739822
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11797030/
Abstract

The mechanisms of bacterial killing by neutrophil extracellular traps (NETs) are unclear. DNA, the largest component of NETs was believed to merely be a scaffold with antimicrobial activity only through the charge of the backbone. Here, we demonstrate for the first time that NETs DNA is beyond a mere scaffold to trap bacteria and it produces hydroxyl free radicals through the spatially concentrated G-quadruplex/hemin DNAzyme complexes, driving bactericidal effects. Immunofluorescence staining showed potential colocalization of G-quadruplex and hemin in extruded NETs DNA, and Amplex UltraRed assay portrayed its peroxidase activity. Proximity labeling of bacteria revealed localized concentration of radicals resulting from NETs bacterial trapping. Ex vivo bactericidal assays revealed that G-quadruplex/hemin DNAzyme is the primary driver of bactericidal activity in NETs. NETs are DNAzymes that may have important biological consequences.

摘要

中性粒细胞胞外陷阱(NETs)杀死细菌的机制尚不清楚。DNA是NETs的最大组成部分,过去人们认为它仅仅是一个支架,仅通过主链电荷具有抗菌活性。在此,我们首次证明NETs DNA不仅仅是捕获细菌的支架,它还通过空间浓缩的G-四链体/血红素DNA酶复合物产生羟基自由基,从而产生杀菌作用。免疫荧光染色显示G-四链体和血红素在挤出的NETs DNA中可能共定位,而Amplex UltraRed检测显示了其过氧化物酶活性。对细菌的邻近标记揭示了NETs捕获细菌产生的自由基的局部浓度。体外杀菌试验表明,G-四链体/血红素DNA酶是NETs杀菌活性的主要驱动因素。NETs是可能具有重要生物学意义的DNA酶。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/a72acd78624d/gkae1262fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/1ad4e47d1211/gkae1262figgra1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/d42ed40e75ee/gkae1262fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/b041fe9cb3e4/gkae1262fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/2394987371a0/gkae1262fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/a72acd78624d/gkae1262fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/1ad4e47d1211/gkae1262figgra1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/d42ed40e75ee/gkae1262fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/b041fe9cb3e4/gkae1262fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/2394987371a0/gkae1262fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcb1/11797030/a72acd78624d/gkae1262fig4.jpg

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Nucleic Acids Res. 2024 Feb 28;52(4):1575-1590. doi: 10.1093/nar/gkae034.
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G-quadruplexes sense natural porphyrin metabolites for regulation of gene transcription and chromatin landscapes.G-四链体感应天然卟啉代谢物以调节基因转录和染色质景观。
Genome Biol. 2022 Dec 15;23(1):259. doi: 10.1186/s13059-022-02830-8.
3
Exploring the catalytic mechanism of multivalent G-quadruplex/hemin DNAzymes by modulating the position and spatial orientation of connected G-quadruplexes.
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Anal Chim Acta. 2022 Aug 15;1221:340105. doi: 10.1016/j.aca.2022.340105. Epub 2022 Jun 21.
4
Bacterial Biofilms Utilize an Underlying Extracellular DNA Matrix Structure That Can Be Targeted for Biofilm Resolution.细菌生物膜利用一种潜在的细胞外DNA基质结构,该结构可作为解决生物膜问题的靶点。
Microorganisms. 2022 Feb 18;10(2):466. doi: 10.3390/microorganisms10020466.
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