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霍乱弧菌和副霍乱弧菌血流感染菌株包含具有共同耐药基因组和毒力基因组特征的谱系。

Vibrio cholerae and Vibrio paracholerae bacteraemia strains encompass lineages that share resistome and virulome profiles.

作者信息

Morgado Sergio Mascarenhas, da Fonseca Erica Lourenço, Vicente Ana Carolina Paulo

机构信息

Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.

出版信息

Mem Inst Oswaldo Cruz. 2025 Feb 3;120:e240159. doi: 10.1590/0074-02760240159. eCollection 2025.

DOI:10.1590/0074-02760240159
PMID:39907417
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11893007/
Abstract

BACKGROUND

Non-O1 and non-O139 Vibrio cholerae (NOVC) that cause bacteraemia have attracted the attention of the public health community around the world, mainly due to the prospect of outbreaks and the way to treat such infections.

OBJECTIVES

To identify V. cholerae lineages and their antibiotic resistance and virulence factors associated with bacteraemia.

METHODS

Vibrio cholerae genomes associated with strains isolated from blood were retrieved and subjected to core genome-based phylogenomic analysis with Roary. The virulome and resistome were searched with abricate using the VFDB and CARD databases.

FINDINGS

Analysis showed that, in addition to V. cholerae, Vibrio paracholerae also causes bacteraemia. The NOVC group was highly diverse, although genomes from different countries were related. Most bacteraemic Vibrios came from countries not affected by epidemic/endemic cholera. The NOVCs virulome presented factors, such as type III and VI secretion systems, HapA, HlyA, RTX, and TLH. Importantly, no resistance to third-generation cephalosporin has been identified in the resistome of NOVCs.

MAIN CONCLUSIONS

The presence of multiple NOVC lineages that cause bacteraemia in different parts of the world shows that there is no geographic and socioeconomic restriction for these cases. Therefore, healthcare systems need to be aware of this uncommon but deadly Vibrio infection.

摘要

背景

引起菌血症的非O1群和非O139群霍乱弧菌(NOVC)已引起全球公共卫生界的关注,主要是由于爆发的可能性以及治疗此类感染的方法。

目的

鉴定与菌血症相关的霍乱弧菌谱系及其抗生素耐药性和毒力因子。

方法

检索与从血液中分离出的菌株相关的霍乱弧菌基因组,并使用Roary进行基于核心基因组的系统发育基因组分析。使用abricate通过VFDB和CARD数据库搜索毒力组和耐药组。

研究结果

分析表明,除霍乱弧菌外,副霍乱弧菌也可引起菌血症。尽管来自不同国家的基因组相关,但NOVC组具有高度多样性。大多数菌血症性弧菌来自未受流行性/地方性霍乱影响的国家。NOVC的毒力组呈现出III型和VI型分泌系统、HapA、HlyA、RTX和TLH等因子。重要的是,在NOVC的耐药组中未发现对第三代头孢菌素的耐药性。

主要结论

在世界不同地区存在多种导致菌血症的NOVC谱系,这表明这些病例不存在地理和社会经济限制。因此,医疗保健系统需要意识到这种罕见但致命的弧菌感染。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abd/11893007/636b78ec9e4f/1678-8060-mioc-120-e240159-gf2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abd/11893007/4c5b7bf0e570/1678-8060-mioc-120-e240159-gf1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abd/11893007/636b78ec9e4f/1678-8060-mioc-120-e240159-gf2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abd/11893007/4c5b7bf0e570/1678-8060-mioc-120-e240159-gf1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abd/11893007/636b78ec9e4f/1678-8060-mioc-120-e240159-gf2.jpg

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本文引用的文献

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Bacteremia: An Enigma in Cholera-Endemic African Countries.菌血症:霍乱流行的非洲国家中的一个谜团。
Trop Med Infect Dis. 2024 May 2;9(5):103. doi: 10.3390/tropicalmed9050103.
2
German coasts harbor non-O1/non-O139 Vibrio cholerae with clinical virulence gene profiles.德国沿海地区存在具有临床毒力基因谱的非 O1/非 O139 霍乱弧菌。
Infect Genet Evol. 2024 Jun;120:105587. doi: 10.1016/j.meegid.2024.105587. Epub 2024 Mar 20.
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Bacteremia by non-O1/non-O139 Vibrio cholerae: Case description and literature review.非 O1/O139 霍乱弧菌菌血症:病例描述和文献回顾。
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Vibrio species bloodstream infections in Queensland, Australia.澳大利亚昆士兰州的弧菌属菌血流感染。
Intern Med J. 2024 Jan;54(1):157-163. doi: 10.1111/imj.16187. Epub 2023 Jul 27.
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Bacteremia Caused by a Serotype Ob5 Vibrio cholerae Strain in a Cirrhotic Patient in China.中国肝硬化患者感染血清型 Ob5 霍乱弧菌导致菌血症。
Microbiol Spectr. 2023 Aug 17;11(4):e0205423. doi: 10.1128/spectrum.02054-23. Epub 2023 Jun 28.
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First report on the occurrence of Vibrio cholerae nonO1/nonO139 in natural and artificial lakes and ponds in Serbia: Evidence for a long-distance transfer of strains and the presence of Vibrio paracholerae.首次在塞尔维亚的天然和人工湖泊及池塘中发现非 O1/O139 霍乱弧菌:菌株长距离转移的证据及副霍乱弧菌的存在。
Environ Microbiol Rep. 2023 Apr;15(2):142-152. doi: 10.1111/1758-2229.13136. Epub 2023 Feb 13.
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Population Analysis of Vibrio cholerae in Aquatic Reservoirs Reveals a Novel Sister Species ( sp. nov.) with a History of Association with Humans.水生水库中霍乱弧菌的种群分析揭示了一种与人类具有历史关联的新型姐妹种(sp. nov.)。
Appl Environ Microbiol. 2021 Aug 11;87(17):e0042221. doi: 10.1128/AEM.00422-21.
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Non-O1, Non-O139 (NOVC) Bacteremia: Case Report and Literature Review, 2015-2019.非O1、非O139(NOVC)菌血症:病例报告及文献综述,2015 - 2019年
Infect Drug Resist. 2020 Apr 7;13:1009-1016. doi: 10.2147/IDR.S245806. eCollection 2020.
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Non-O1/non-O139 septicaemia in a Saudi man: a case report.一名沙特男子的非O1/非O139败血症:病例报告
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