Kozyra Iwona, Kocki Janusz, Rzeżutka Artur
Department of Food and Environmental Virology National Veterinary Research Institute, Al. Partyzantów 57, Puławy 24-100, Poland.
Department of Medical Genetics Medical University of Lublin, ul. Radziwiłłowska 11, Lublin 20-080, Poland.
Transbound Emerg Dis. 2024 Sep 24;2024:4232389. doi: 10.1155/2024/4232389. eCollection 2024.
Group A rotaviruses (RVAs) are widespread in humans and many animal species and represent the most epidemiologically important rotavirus group. The aim of the study was the identification of the genotype pattern of human RVA strains circulating in Poland, assessment of their phylogenetic relationships to pig RVAs and identification of reassortant and zoonotic virus strains. Human stool samples which were RVA positive ( = 166) were collected from children and adults at the age of 1 month to 74 years with symptoms of diarrhoea. Identification of the G and P genotypes of human RVAs as well as the complete genotype of reassortant and zoonotic virus strains was performed by the use of an RT-PCR method. The G (G1-G4, G8 or G9) and/or P (P[4], P[6], P[8] or P[9]) genotypes were determined for 148 (89.2%) out of 166 RVA strains present in human stool. G1P[8] RVA strains prevailed, and G4P[8] (20.5%), G9P[8] (15.7%) and G2P[4] (13.3%) human RVA strains were also frequently identified. The full genome analysis of human G4P[6] as well as pig G1P[8] and G5P[6] RVAs revealed the occurrence of porcine-human reassortants and zoonotic RVAs. Detection of G4P[6] in pigs confirms their role as a reservoir of zoonotic RVAs.
A组轮状病毒(RVAs)广泛存在于人类和许多动物物种中,是流行病学上最重要的轮状病毒组。本研究的目的是鉴定在波兰流行的人类RVA毒株的基因型模式,评估它们与猪RVA的系统发育关系,并鉴定重配病毒株和人畜共患病毒株。从1个月至74岁有腹泻症状的儿童和成人中收集RVA呈阳性的人类粪便样本(n = 166)。通过逆转录聚合酶链反应(RT-PCR)方法对人类RVA的G和P基因型以及重配病毒株和人畜共患病毒株的完整基因型进行鉴定。在166株人类粪便中的RVA毒株中,有148株(89.2%)确定了G(G1-G4、G8或G9)和/或P(P[4]、P[6]、P[8]或P[9])基因型。G1P[8] RVA毒株占主导地位,同时也经常鉴定出G4P[8](20.5%)、G9P[8](15.7%)和G2P[4](13.3%)人类RVA毒株。对人类G4P[6]以及猪G1P[8]和G5P[6] RVAs的全基因组分析揭示了猪-人重配病毒株和人畜共患RVAs的存在。在猪中检测到G4P[6]证实了它们作为人畜共患RVAs储存宿主的作用。