Chen Xue-Yao, Xiao Xiu-Ru, Zhang Yan, Zhang Zhi-Chao, Zhang Dong-Sheng, Liu Zheng, Lin Xiao-Long
Engineering Research Center of Environmental DNA and Ecological Water Health Assessment, Shanghai Ocean University, Shanghai 201306, China.
Shanghai Universities Key Laboratory of Marine Animal Taxonomy and Evolution, Shanghai Ocean University, Shanghai 201306, China.
Insects. 2025 Apr 16;16(4):420. doi: 10.3390/insects16040420.
, a genus within the species-rich subfamily Orthocladiinae (Diptera: Chironomidae), remains poorly resolved in molecular phylogenetics due to limited available molecular data. Here, we sequenced and analyzed the complete mitogenomes of five species, using two species as outgroups. Our results reveal that the mitogenomes of are structurally conserved and retain a presumed ancestral gene order. The nucleotide composition of these newly generated mitogenomes exhibits a pronounced A + T bias, which is characteristic of typical insect mitogenomes. The substitution rates, estimated using Ka/Ks ratios, indicate that all protein-coding genes are under purifying selection. The strongest purifying selection pressure was observed in the gene, while the weakest was in the gene. Both the maximum likelihood and Bayesian inference trees consistently show the following topology: (((( + ) + ) + ) + ). This study provides key insights into chironomid mitogenomes and their gene properties, offering valuable reference data for future research.
由于可用分子数据有限,物种丰富的直突摇蚊亚科(双翅目:摇蚊科)中的一个属在分子系统发育学中仍未得到很好的解析。在此,我们对五个物种的完整线粒体基因组进行了测序和分析,并使用两个物种作为外类群。我们的结果表明,该属的线粒体基因组在结构上是保守的,并保留了推测的祖先基因顺序。这些新生成的线粒体基因组的核苷酸组成表现出明显的A+T偏向,这是典型昆虫线粒体基因组的特征。使用Ka/Ks比率估计的替换率表明,所有蛋白质编码基因都受到纯化选择。在该基因中观察到最强的纯化选择压力,而在该基因中最弱。最大似然树和贝叶斯推断树都一致显示出以下拓扑结构:(((( + ) + ) + ) + )。本研究为摇蚊线粒体基因组及其基因特性提供了关键见解,为未来研究提供了有价值的参考数据。