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时间尺度网络:一种用于生物医学应用中时间序列数据的高效浅层神经网络。

Time Scale Network: An Efficient Shallow Neural Network For Time Series Data in Biomedical Applications.

作者信息

Meyer Trevor, Shultz Camden, Dehak Najim, Moro-Velázquez Laureano, Irazoqui Pedro

机构信息

Department of Electrical and Computer Engineering at Johns Hopkins University.

出版信息

IEEE J Sel Top Signal Process. 2025 Jan;19(1):129-139. doi: 10.1109/JSTSP.2024.3443659. Epub 2024 Aug 15.

DOI:10.1109/JSTSP.2024.3443659
PMID:40370581
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12074648/
Abstract

Time series data is often composed of information at multiple time scales, particularly in biomedical data. While numerous deep learning strategies exist to capture this information, many make networks larger, require more data, are more demanding to compute, and are difficult to interpret. This limits their usefulness in real-world settings facing even modest computational or data constraints and can further complicate their translation into real-time processing or edge device applicaitons. We present a minimal, computationally efficient Time Scale Network combining the translation and dilation sequence used in discrete wavelet transforms with traditional convolutional neural networks and back-propagation. The network simultaneously learns features at many time scales for sequence classification with significantly reduced parameters and operations. We demonstrate advantages in Atrial Dysfunction detection including: superior accuracy-per-parameter and accuracy-per-operation, fast training and inference speeds, and visualization and interpretation of learned patterns in atrial dysfunction detection on ECG signals. We also demonstrate impressive performance in seizure prediction using EEG signals, where our network isolated a few time scales that could be strategically selected to achieve 90.9% accuracy using only 1,133 active parameters and consistently converged on pulsatile waveform shapes. This method does not rest on any constraints or assumptions regarding signal content and could be leveraged in any area of time series analysis dealing with signals containing features at many time scales.

摘要

时间序列数据通常由多个时间尺度的信息组成,特别是在生物医学数据中。虽然存在许多深度学习策略来捕获这些信息,但许多策略会使网络更大,需要更多数据,计算要求更高,并且难以解释。这限制了它们在面临即使是适度计算或数据约束的实际应用中的实用性,并且可能进一步使它们转化为实时处理或边缘设备应用变得复杂。我们提出了一种最小化、计算高效的时间尺度网络,它将离散小波变换中使用的平移和扩张序列与传统卷积神经网络和反向传播相结合。该网络同时在多个时间尺度上学习特征以进行序列分类,参数和操作显著减少。我们展示了在心房功能障碍检测中的优势,包括:每个参数的卓越准确性和每个操作的准确性、快速的训练和推理速度,以及对心电图信号心房功能障碍检测中学习模式的可视化和解释。我们还展示了在使用脑电图信号进行癫痫预测方面的令人印象深刻的性能,我们的网络分离出了一些可以有策略地选择的时间尺度,仅使用1133个有效参数就能实现90.9%的准确率,并且始终收敛于脉动波形形状。该方法不依赖于关于信号内容的任何约束或假设,并且可用于处理包含多个时间尺度特征信号的时间序列分析的任何领域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/fc7fa3a87082/nihms-2061539-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/c6c11c7bb5e9/nihms-2061539-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/ec0609e67df3/nihms-2061539-f0002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/ea25b745dc78/nihms-2061539-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/fc7fa3a87082/nihms-2061539-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/c6c11c7bb5e9/nihms-2061539-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/ec0609e67df3/nihms-2061539-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/9960a0a7e06a/nihms-2061539-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/ea25b745dc78/nihms-2061539-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4b57/12074648/fc7fa3a87082/nihms-2061539-f0005.jpg

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