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使用多基因风险评分在多样化生物样本库中预测胸主动脉夹层。

Predicting Thoracic Aortic Dissection in a Diverse Biobank Using a Polygenic Risk Score.

作者信息

DePaolo John, Zamirpour Siavash, Abramowitz Sarah, Biagetti Gina, Judy Renae, Beeche Cameron, Duda Jeffrey, Gee James, Witschey Walter R, Chirinos Julio A, Goel Nicholas J, Desai Nimesh, Szeto Wilson Y, Guo Dongchuan, Milewicz Dianna M, Levin Michael G, Pirruccello James P, Damrauer Scott M

机构信息

Department of Surgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

Institute for Human Genetics, University of California-San Francisco, San Francisco, California, USA.

出版信息

JACC Adv. 2025 May;4(5):101743. doi: 10.1016/j.jacadv.2025.101743.

Abstract

BACKGROUND

Thoracic aortic dissection is a life-threatening condition that often occurs in the presence of aortic dilation. However, currently there are limited clinical risk factors beyond aortic diameter (AoD) used to determine individual-level dissection risk.

OBJECTIVES

The purpose of this study was to determine whether common variant genetics can be used to improve identification of individuals most at risk for dissection.

METHODS

A genome-wide association study (GWAS)-by-subtraction was performed to characterize the diameter-independent genetics of thoracic aortic dissection by subtracting a GWAS of AoD from a GWAS of thoracic aortic aneurysm and dissection. A polygenic risk score (PRS) was calculated using the PRS-Continuous Shrinkage statistical package and applied to Penn Medicine BioBank participants. Statistical analysis was performed in R version 4.3.2.

RESULTS

We identified 43 genetic risk loci associated with dissection and derived a "Dissection-PRS" from our GWAS-by-subtraction. In the Penn Medicine BioBank, the Dissection-PRS associated with prevalent dissection (OR: 2.13 per 1 SD increase in Dissection-PRS; 95% CI: 1.91-2.39; P < 0.001). When adjusting for risk factors including AoD, the association of the Dissection-PRS with prevalent dissection was attenuated but remained statistically robust (OR: 1.62 per 1 SD increase in PRS; 95% CI: 1.36-1.94; P < 0.001). The addition of the PRS to a model containing age, sex, and clinical risk factors substantially improved model discrimination (base model area under the receiver operator characteristic curve = 0.676; 95% CI: 0.651-0.702; with addition of PRS area under the receiver operator characteristic curve = 0.723; 95% CI: 0.702-0.744).

CONCLUSIONS

A common-variant PRS can predict aortic dissection in a diverse population.

摘要

背景

胸主动脉夹层是一种危及生命的疾病,常发生于主动脉扩张的情况下。然而,目前除了主动脉直径(AoD)外,用于确定个体层面夹层风险的临床危险因素有限。

目的

本研究的目的是确定常见变异基因是否可用于改善对夹层风险最高个体的识别。

方法

通过从胸主动脉瘤和夹层的全基因组关联研究(GWAS)中减去AoD的GWAS,进行了一项减法全基因组关联研究(GWAS-by-subtraction),以表征胸主动脉夹层的直径独立遗传学特征。使用PRS-Continuous Shrinkage统计软件包计算多基因风险评分(PRS),并应用于宾夕法尼亚大学医学生物银行的参与者。在R版本4.3.2中进行统计分析。

结果

我们鉴定出43个与夹层相关的遗传风险位点,并从我们的减法GWAS中得出了一个“夹层-PRS”。在宾夕法尼亚大学医学生物银行中,夹层-PRS与现患夹层相关(每1个标准差增加的夹层-PRS的比值比:2.13;95%置信区间:1.91-2.39;P<0.001)。在调整包括AoD在内的危险因素后,夹层-PRS与现患夹层的关联减弱,但仍具有统计学显著性(每1个标准差增加的PRS的比值比:1.62;95%置信区间:1.36-1.94;P<0.001)。将PRS添加到包含年龄、性别和临床危险因素的模型中,显著改善了模型的辨别力(基础模型的受试者操作特征曲线下面积=0.676;95%置信区间:0.651-0.702;添加PRS后的受试者操作特征曲线下面积=0.723;95%置信区间:0.702-0.744)。

结论

常见变异PRS可在不同人群中预测主动脉夹层。

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