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网络化多价蛋白质凝聚物的应急力学

Emergent mechanics of a networked multivalent protein condensate.

作者信息

Liao Zhitao, Jia Bowen, Guan Dongshi, Chen Xudong, Zhang Mingjie, Tong Penger

机构信息

Department of Physics, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong.

Division of Life Science, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong.

出版信息

Nat Commun. 2025 Jun 5;16(1):5237. doi: 10.1038/s41467-025-60345-9.

DOI:10.1038/s41467-025-60345-9
PMID:40473633
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12141447/
Abstract

Multivalent proteins can form membraneless condensates in cells by liquid-liquid phase separation, and significant efforts have been made to study their biochemical properties. Here, we demonstrate the emergent mechanics of a functional multivalent condensate reconstituted with six postsynaptic density proteins, using atomic-force-microscopy-based mesoscale rheology and quantitative fluorescence measurements. The measured relaxation modulus and protein mobility reveal that the majority (80%) of the proteins in the condensate are mobile and diffuse through a dynamically cross-linked network made of the remaining (20%) non-mobile scaffold proteins. This percolating structure gives rise to a two-mode mechanical relaxation with an initial exponential decay followed by a long-time power-law decay, which differs significantly from simple Maxwell fluids. The power-law rheology with an exponent α ≃ 0.5 is a hallmark of weak bonds' binding/unbinding dynamics in the multivalent protein network. The concurrent molecular and mechanical profiling thus provides a reliable readout for characterizing the mechanical state of protein condensates and investigating their physiological functions and associations with diseases.

摘要

多价蛋白可通过液-液相分离在细胞中形成无膜凝聚物,并且人们已付出巨大努力来研究它们的生化特性。在此,我们利用基于原子力显微镜的中尺度流变学和定量荧光测量,展示了由六种突触后致密蛋白重构的功能性多价凝聚物的新兴力学特性。所测得的弛豫模量和蛋白质迁移率表明,凝聚物中大多数(80%)蛋白质是可移动的,并通过由其余(20%)不可移动的支架蛋白构成的动态交联网络扩散。这种渗流结构产生了一种双模式机械弛豫,先是初始指数衰减,随后是长时间幂律衰减,这与简单麦克斯韦流体有显著差异。指数α≃0.5的幂律流变学是多价蛋白质网络中弱键结合/解离动力学的一个标志。因此,同时进行的分子和力学分析为表征蛋白质凝聚物的力学状态以及研究它们的生理功能和与疾病的关联提供了可靠的读数。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/5f0dddb6e4f7/41467_2025_60345_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/f2d74cda0687/41467_2025_60345_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/7417a5e487ff/41467_2025_60345_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/712e0b2762bb/41467_2025_60345_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/5f0dddb6e4f7/41467_2025_60345_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/f2d74cda0687/41467_2025_60345_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/7417a5e487ff/41467_2025_60345_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/712e0b2762bb/41467_2025_60345_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31a5/12141447/5f0dddb6e4f7/41467_2025_60345_Fig4_HTML.jpg

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本文引用的文献

1
Sequence-specific interactions determine viscoelasticity and aging dynamics of protein condensates.序列特异性相互作用决定了蛋白质凝聚物的粘弹性和老化动力学。
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Demixing is a default process for biological condensates formed via phase separation.去混合是通过相分离形成的生物凝聚物的默认过程。
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A solid beta-sheet structure is formed at the surface of FUS droplets during aging.
在老化过程中,FUS 液滴的表面形成了一个坚固的β-折叠结构。
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Sequence-dependent material properties of biomolecular condensates and their relation to dilute phase conformations.生物分子凝聚物的序列依赖性材料特性及其与稀相构象的关系。
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Extreme dynamics in a biomolecular condensate.生物分子凝聚物中的极端动力学。
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Engineering synthetic biomolecular condensates.工程化合成生物分子凝聚物。
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Phase separation-mediated actin bundling by the postsynaptic density condensates.突触后密度凝聚介导的相分离肌动蛋白束。
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Biological condensates form percolated networks with molecular motion properties distinctly different from dilute solutions.生物凝聚物形成的渗滤网络具有与稀溶液显著不同的分子运动性质。
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9
Time-Dependent Material Properties of Aging Biomolecular Condensates from Different Viscoelasticity Measurements in Molecular Dynamics Simulations.基于分子动力学模拟的不同粘弹性测量的老化生物分子凝聚物的时变材料特性。
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Capillary forces generated by biomolecular condensates.由生物分子凝聚物产生的毛细作用力。
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