一种覆盖型海绵（Vacelet & Donadey，1987）的支架水平基因组序列及其相关的微生物宏基因组序列。
The scaffold-level genome sequence of an encrusting sponge, Vacelet & Donadey, 1987, and its associated microbial metagenome sequences.
作者信息
de Goeij Jasper M, Mueller Benjamin, Achlatis Michelle, Campana Sara, Hudspith Meggie, Kornder Niklas A, Hentschel Ute, Oatley Graeme, Sinclair Elizabeth, Aunin Eerik, Gettle Noah, Santos Camilla, Paulini Michael, Niu Haoyu, McKenna Victoria, O'Brien Rebecca
机构信息
Department of Freshwater and Marine Ecology, University of Amsterdam, Amsterdam, The Netherlands.
CARMABI Foundation, Willemstad, Curaçao, The Netherlands.
出版信息
Wellcome Open Res. 2025 Jul 9;10:344. doi: 10.12688/wellcomeopenres.24281.1. eCollection 2025.
We present a scaffold-level genome assembly from a specimen (encrusting sponge; Porifera; Demospongiae; Chondrillida; Halisarcidae). The genome sequence is 195.70 megabases in span. The mitochondrial genome has also been assembled and is 19.15 kilobases in length. Gene annotation of this assembly on Ensembl identified 26,722 protein-coding genes. The metagenome of the specimen was also assembled and four binned bacterial genomes related to the relevant sponge symbiont clades Alphaproteobacteria bacterium GM7ARS4 and Gammaproteobacteria bacterium ((Tethybacterales) were identified.
我们展示了一个来自某样本（包被海绵；多孔动物门；寻常海绵纲；软海绵目；Halicarcidae科）的支架水平的基因组组装。基因组序列跨度为195.70兆碱基。线粒体基因组也已组装完成，长度为19.15千碱基。在Ensembl上对该组装进行的基因注释识别出26,722个蛋白质编码基因。该样本的宏基因组也已组装完成，并且鉴定出了四个与相关海绵共生菌分支——α变形菌纲细菌GM7ARS4和γ变形菌纲细菌（属于Tethybacterales目）相关的分箱细菌基因组。
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