计算机对序列数据的处理
Sequence data handling by computer.
作者信息
Staden R
出版信息
Nucleic Acids Res. 1977 Nov;4(11):4037-51. doi: 10.1093/nar/4.11.4037.
Abstract
The speed of the new DNA sequencing techniques has created a need for computer programs to handle the data produced. This paper describes simple programs designed specifically for use by people with little or no computer experience. The programs are for use on small computers and provide facilities for storage, editing and analysis of both DNA and amino acid sequences. A magnetic tape containing these programs is available on request.
摘要
新型DNA测序技术的速度催生了对处理所产生数据的计算机程序的需求。本文描述了专门为几乎没有或没有计算机经验的人设计的简单程序。这些程序可在小型计算机上使用，并提供对DNA和氨基酸序列进行存储、编辑和分析的功能。如有需要，可提供包含这些程序的磁带。
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Sequence data handling by computer.计算机对序列数据的处理
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本文引用的文献
1
A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase.一种通过DNA聚合酶引发合成来测定DNA序列的快速方法。
J Mol Biol. 1975 May 25;94(3):441-8. doi: 10.1016/0022-2836(75)90213-2.
2
Nucleotide sequence of bacteriophage phi X174 DNA.噬菌体φX174 DNA的核苷酸序列。
Nature. 1977 Feb 24;265(5596):687-95. doi: 10.1038/265687a0.
3
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Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4. doi: 10.1073/pnas.74.2.560.
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