Berthou J, Lifchitz A, Artymiuk P, Jollès P
Proc R Soc Lond B Biol Sci. 1983 Mar 22;217(1209):471-89. doi: 10.1098/rspb.1983.0021.
The structure of the high-temperature orthorhombic form of hen egg-white lysozyme has been determined at 2.0 A resolution. Initial images of the molecule were obtained at 6.0 A resolution both by double isomorphous replacement and by molecular replacement with use of the known structure of the room-temperature tetragonal lysozyme. The initial model thus obtained (R = 0.52 at 6.0 A) was refined first as a rigid body at 6.0 A and then by restrained least squares at 2.5 A and later at 2.0 A resolution. The final model (R = 0.23 at 2.0 A) was compared with that of the tetragonal form: the structures are very similar with a root mean square difference in superimposed alpha-carbon coordinates of 0.46 A. There are, however, differences which are caused by a crystal contact involving the upper part of this active site in the high-temperature orthorhombic form. Because of this, residues Trp 62 and Pro 70 are much better ordered than in the tetragonal form, where they are exposed to solvent. These differences can partly explain the difficulty of inhibitor-binding in high-temperature orthorhombic crystals, but do not seem to reflect the particular behaviour of lysozyme in solution at high temperature.
已在2.0埃分辨率下测定了鸡蛋清溶菌酶高温正交晶型的结构。通过双同晶置换以及使用室温四方晶型溶菌酶的已知结构进行分子置换,在6.0埃分辨率下获得了该分子的初始图像。由此得到的初始模型(在6.0埃时R = 0.52)首先在6.0埃分辨率下作为刚体进行精修,然后在2.5埃分辨率下通过约束最小二乘法进行精修,之后在2.0埃分辨率下精修。将最终模型(在2.0埃时R = 0.23)与四方晶型的模型进行比较:两种结构非常相似,叠加后的α-碳坐标的均方根差异为0.46埃。然而,存在一些差异,这些差异是由高温正交晶型中涉及该活性位点上部的晶体接触引起的。因此,色氨酸62和脯氨酸70残基的有序程度比四方晶型中更好,在四方晶型中它们暴露于溶剂中。这些差异可以部分解释在高温正交晶型晶体中抑制剂结合的困难,但似乎并不反映溶菌酶在高温溶液中的特殊行为。