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来自仙台病毒基因组RNA 3'端的3687个核苷酸序列以及病毒核蛋白(NP)、磷蛋白(P)和C蛋白的预测氨基酸序列。

Sequence of 3,687 nucleotides from the 3' end of Sendai virus genome RNA and the predicted amino acid sequences of viral NP, P and C proteins.

作者信息

Shioda T, Hidaka Y, Kanda T, Shibuta H, Nomoto A, Iwasaki K

出版信息

Nucleic Acids Res. 1983 Nov 11;11(21):7317-30. doi: 10.1093/nar/11.21.7317.

DOI:10.1093/nar/11.21.7317
PMID:6316257
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326485/
Abstract

The sequence of 3,687 nucleotides from the 3' end of the Sendai virus genome (Z strain) was determined by a molecular cloning technique followed by rapid sequence analysis. Two large open reading frames, one consisting of 1,572 nucleotides and the other of 1,704 nucleotides, were observed in the region, that is OP-1 and OP-2 from the 3' end of the genome. The amino acid sequences of the gene products were predicted from the observed sequence. Determination of amino acid compositions of viral proteins, P, HN, Fo, NP and M, led us to conclude that NP and P are the gene products of OP-1 and OP-2, respectively. An additional open reading frame consisting of 612 nucleotides (OP-3) was discovered in the 3' most proximal region of OP-2. The predicted product of OP-3 was considered to be viral non-structural protein C. The leader sequence of 51 nucleotides at the 3' terminal of the genome and consensus sequences at 3' and 5' ends of each gene for proteins NP and P were identified.

摘要

通过分子克隆技术及快速序列分析,确定了仙台病毒基因组(Z株)3'端3687个核苷酸的序列。在该区域观察到两个大的开放阅读框,一个由1572个核苷酸组成,另一个由1704个核苷酸组成,即从基因组3'端起的OP-1和OP-2。根据观察到的序列预测了基因产物的氨基酸序列。对病毒蛋白P、HN、Fo、NP和M的氨基酸组成的测定使我们得出结论,NP和P分别是OP-1和OP-2的基因产物。在OP-2的最靠近3'端的区域发现了一个由612个核苷酸组成的额外开放阅读框(OP-3)。OP-3的预测产物被认为是病毒非结构蛋白C。确定了基因组3'末端的51个核苷酸的前导序列以及NP和P蛋白每个基因3'和5'末端的共有序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6cef/326485/5d1b9e36f55a/nar00366-0079-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6cef/326485/5d1b9e36f55a/nar00366-0079-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6cef/326485/5d1b9e36f55a/nar00366-0079-a.jpg

相似文献

1
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本文引用的文献

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Sequence analysis of the polymerase 1 gene and the secondary structure prediction of polymerase 1 protein of human influenza virus A/WSN/33.甲型流感病毒A/WSN/33聚合酶1基因的序列分析及聚合酶1蛋白的二级结构预测
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Comparison of the nucleotide sequences at the 3'-terminal region of RNAs from RNA coliphages.RNA 噬菌体 RNA 3' 末端区域核苷酸序列的比较。
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The complete sequence and coding content of snowshoe hare bunyavirus small (S) viral RNA species.
如果有机会,仙台病毒RNA依赖的RNA聚合酶也可以从内部进入其模板。
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"Rule of six": how does the Sendai virus RNA polymerase keep count?“六规则”:仙台病毒RNA聚合酶如何计数?
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Rinderpest viruses lacking the C and V proteins show specific defects in growth and transcription of viral RNAs.缺乏C蛋白和V蛋白的牛瘟病毒在病毒RNA的生长和转录方面表现出特定缺陷。
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Sendai virus gene start signals are not equivalent in reinitiation capacity: moderation at the fusion protein gene.仙台病毒基因起始信号在重新起始能力方面并不等同:融合蛋白基因处的调控
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The activity of Sendai virus genomic and antigenomic promoters requires a second element past the leader template regions: a motif (GNNNNN)3 is essential for replication.仙台病毒基因组和反基因组启动子的活性在leader模板区域之外还需要第二个元件:一个基序(GNNNNN)3对复制至关重要。
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Inhibition of Sendai virus genome replication due to promoter-increased selectivity: a possible role for the accessory C proteins.由于启动子选择性增加导致仙台病毒基因组复制受到抑制:辅助C蛋白的潜在作用。
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Molecular cloning of the 3'-proximal third of Sendai virus genome.仙台病毒基因组3'端近三分之一区域的分子克隆
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Genomic and copy-back 3' termini in Sendai virus defective interfering RNA species.仙台病毒缺陷干扰RNA物种中的基因组和回拷3'末端。
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In vitro synthesis of the nonstructural C protein of Sendai virus.仙台病毒非结构C蛋白的体外合成
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Conserved polyadenylation signals in two negative-strand RNA virus families.两个负链RNA病毒家族中保守的聚腺苷酸化信号。
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Mononucleotide and dinucleotide frequencies, and codon usage in poliovirion RNA.脊髓灰质炎病毒RNA中的单核苷酸和二核苷酸频率以及密码子使用情况。
Nucleic Acids Res. 1981 Dec 11;9(23):6221-9. doi: 10.1093/nar/9.23.6221.