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Conformational study of two short pentadeoxyribonucleotides, d-CpCpApApG and d-CpTpTpGpG, and their fragments by proton nuclear magnetic resonance.

作者信息

Cheng D M, Kan L S, Leutzinger E E, Jayaraman K, Miller P S, Ts'o P O

出版信息

Biochemistry. 1982 Feb 16;21(4):621-30. doi: 10.1021/bi00533a004.

DOI:10.1021/bi00533a004
PMID:7074028
Abstract
摘要

相似文献

1
Conformational study of two short pentadeoxyribonucleotides, d-CpCpApApG and d-CpTpTpGpG, and their fragments by proton nuclear magnetic resonance.通过质子核磁共振对两种短链脱氧核糖核苷酸d-CpCpApApG和d-CpTpTpGpG及其片段进行构象研究。
Biochemistry. 1982 Feb 16;21(4):621-30. doi: 10.1021/bi00533a004.
2
Nuclear magnetic resonance of nucleotide-amidates. Investigation of the secondary structure of methylester of deoxyadenylyl-(5'-3')-deoxyadenylyl-(5' leads to N)-L-phenylalanine.核苷酸酰胺的核磁共振。脱氧腺苷酰基-(5'-3')-脱氧腺苷酰基-(5'至N)-L-苯丙氨酸甲酯二级结构的研究。
Nucleic Acids Res. 1977 Aug;4(8):2609-17. doi: 10.1093/nar/4.8.2609.
3
A double helix B-type geometry based on high-resolution proton NMR of single-helical DNA fragments: d(TA)5 x d(TA)5.基于单链螺旋DNA片段高分辨率质子核磁共振的双螺旋B型结构:d(TA)5 x d(TA)5
Nucleic Acids Res. 1983 May 11;11(9):2893-905. doi: 10.1093/nar/11.9.2893.
4
Solution conformation of the double helix formed by Dickerson's dodecamer d(CGCGAATTCGCG): a theoretical proton NMR study.迪克森十二聚体d(CGCGAATTCGCG)形成的双螺旋的溶液构象:一项理论质子核磁共振研究。
Biochem Biophys Res Commun. 1982 Aug 31;107(4):1539-44. doi: 10.1016/s0006-291x(82)80174-5.
5
Assignment of non-exchangeable base proton and H1' resonances of a deoxyoctanucleoside heptaphosphate d(G-G-C*-C*-G-G-C-C) by using the nuclear Overhauser effect.利用核Overhauser效应确定脱氧八聚核苷酸七磷酸d(G-G-C*-C*-G-G-C-C)中不可交换碱基质子和H1'共振峰的归属
Nucleic Acids Res. 1983 May 25;11(10):3333-46. doi: 10.1093/nar/11.10.3333.
6
Detection of a guanine X adenine base pair in a decadeoxyribonucleotide by proton magnetic resonance spectroscopy.通过质子磁共振光谱法检测脱氧核糖核苷酸中的鸟嘌呤X腺嘌呤碱基对。
Proc Natl Acad Sci U S A. 1983 Jul;80(14):4263-5. doi: 10.1073/pnas.80.14.4263.
7
Sequential resonance assignments in 1H NMR spectra of oligonucleotides by two-dimensional NMR spectroscopy.通过二维核磁共振光谱对寡核苷酸的1H NMR光谱进行顺序共振归属。
Biochemistry. 1984 Mar 27;23(7):1371-6. doi: 10.1021/bi00302a006.
8
Aqueous solution structure of an intercalated actinomycin D-dATGCAT complex by two-dimensional and one-dimensional proton NMR.通过二维和一维质子核磁共振研究嵌入的放线菌素D-dATGCAT复合物的水溶液结构
Biochemistry. 1984 Jan 31;23(3):403-8. doi: 10.1021/bi00298a003.
9
Proton NMR study of the B----Z transition of d(CGm5CG)2 and d(CGm5CGCG)2: theory and experiment.d(CGm5CG)2和d(CGm5CGCG)2的B----Z转变的质子核磁共振研究:理论与实验
Nucleic Acids Res. 1984 Apr 11;12(7):3271-81. doi: 10.1093/nar/12.7.3271.
10
An investigation into the solution structures of two self-complementary DNA oligomers, 5'-d(C-G-T-A-C-G) and 5'-d(A-C-G-C-G-C-G-T), by means of nuclear-Overhauser-enhancement measurements.通过核Overhauser增强测量对两种自互补DNA寡聚体5'-d(C-G-T-A-C-G)和5'-d(A-C-G-C-G-C-G-T)的溶液结构进行的研究。
Biochem J. 1984 Aug 1;221(3):723-36. doi: 10.1042/bj2210723.

引用本文的文献

1
Development of Force Field Parameters for the Simulation of Single- and Double-Stranded DNA Molecules and DNA-Protein Complexes.开发用于模拟单链和双链 DNA 分子以及 DNA-蛋白质复合物的力场参数。
J Phys Chem B. 2022 Jun 23;126(24):4442-4457. doi: 10.1021/acs.jpcb.1c10971. Epub 2022 Jun 12.
2
Assignment of non-exchangeable base proton and H1' resonances of a deoxyoctanucleoside heptaphosphate d(G-G-C*-C*-G-G-C-C) by using the nuclear Overhauser effect.利用核Overhauser效应确定脱氧八聚核苷酸七磷酸d(G-G-C*-C*-G-G-C-C)中不可交换碱基质子和H1'共振峰的归属
Nucleic Acids Res. 1983 May 25;11(10):3333-46. doi: 10.1093/nar/11.10.3333.
3
Proton NMR study and conformational analysis of d(CGT), d(TCG) and d(CGTCG) in aqueous solution. The effect of a dangling thymidine and of a thymidine mismatch on DNA mini-duplexes.
水溶液中d(CGT)、d(TCG)和d(CGTCG)的质子核磁共振研究与构象分析。游离胸苷和胸苷错配对DNA小双链体的影响。
Nucleic Acids Res. 1984 Jun 25;12(12):5061-78. doi: 10.1093/nar/12.12.5061.
4
Synthesis, complete 1H assignments and conformations of the self-complementary hexadeoxyribonucleotide [d(CpGpApTpCpG)]2 and its fragments by high field NMR.通过高场核磁共振对自互补十六脱氧核糖核苷酸[d(CpGpApTpCpG)]2及其片段进行合成、完整的1H归属和构象分析。
Nucleic Acids Res. 1984 Mar 12;12(5):2519-33. doi: 10.1093/nar/12.5.2519.
5
An investigation into the solution structure of the single-stranded DNA undecamer 5'd AAGTGTGATAT by means of nuclear Overhauser enhancement measurements.通过核Overhauser效应测量对单链DNA十一聚体5'd AAGTGTGATAT的溶液结构进行研究。
Eur Biophys J. 1984;11(2):95-102. doi: 10.1007/BF00276624.
6
Proton NMR studies on the covalently linked RNA-DNA hybrid r(GCG)d(TATACGC). Assignment of proton resonances by application of the nuclear Overhauser effect.关于共价连接的RNA-DNA杂交体r(GCG)d(TATACGC)的质子核磁共振研究。通过应用核Overhauser效应确定质子共振峰。
Nucleic Acids Res. 1983 Aug 25;11(16):5717-38. doi: 10.1093/nar/11.16.5717.