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来自四膜虫的核糖体RNA基因内含子序列。

Sequence of a ribosomal RNA gene intron from Tetrahymena.

作者信息

Wild M A, Sommer R

出版信息

Nature. 1980 Feb 14;283(5748):693-4. doi: 10.1038/283693a0.

DOI:10.1038/283693a0
PMID:7354863
Abstract

Recently, several genes coding for messenger RNA, transfer RNA and ribosomal RNA in eukaryotes have been found to be interrupted in their coding regions by DNA sequences which are not represented in the mature RNA transcripts (see ref. 1 for review). Many of these intervening sequences, or introns, are now known to be transcribed in the precursor RNA, from which they are subsequently processed out to form the mature RNA. As the intron-exon junctions must in some way be recognised for accurate splicing, the nucleotide sequences of these regions from a number of protein-coding and tRNA genes have been analysed. Sequence homologies were found at the splice points of the protein-coding gene introns from diverse organisms, but the tRNA intron boundaries were not similar to these. This has led to the speculation that different splicing activities are necessary for the processing of introns in mRNA and tRNA precursors. We report here the sequence of a ribosomal RNA gene intron from Tetrahymena in which intron-exon junctions differ from those analysed to date.

摘要

最近,人们发现真核生物中一些编码信使RNA、转运RNA和核糖体RNA的基因,其编码区域被一些在成熟RNA转录本中不存在的DNA序列所中断(综述见参考文献1)。现在已知许多这些间隔序列,即内含子,会在前体RNA中被转录,随后从中被加工去除以形成成熟RNA。由于内含子 - 外显子连接点必须以某种方式被识别才能进行准确的剪接,因此对许多蛋白质编码基因和tRNA基因这些区域的核苷酸序列进行了分析。在来自不同生物体的蛋白质编码基因内含子的剪接位点发现了序列同源性,但tRNA内含子边界与这些不同。这引发了一种推测,即mRNA和tRNA前体中内含子的加工需要不同的剪接活性。我们在此报告来自嗜热栖热菌的一个核糖体RNA基因内含子的序列,其中内含子 - 外显子连接点与迄今为止分析的不同。

相似文献

1
Sequence of a ribosomal RNA gene intron from Tetrahymena.来自四膜虫的核糖体RNA基因内含子序列。
Nature. 1980 Feb 14;283(5748):693-4. doi: 10.1038/283693a0.
2
Characterization of an authentic intermediate in the self-splicing process of ribosomal precursor RNA in macronuclei of Tetrahymena thermophila.嗜热栖热四膜虫大核核糖体前体RNA自我剪接过程中真实中间体的表征
Nucleic Acids Res. 1987 Mar 11;15(5):1905-20. doi: 10.1093/nar/15.5.1905.
3
New reactions of the ribosomal RNA precursor of Tetrahymena and the mechanism of self-splicing.嗜热四膜虫核糖体RNA前体的新反应及自我剪接机制
J Mol Biol. 1986 May 5;189(1):143-65. doi: 10.1016/0022-2836(86)90387-6.
4
Self-splicing of yeast mitochondrial ribosomal and messenger RNA precursors.酵母线粒体核糖体RNA前体和信使RNA前体的自我剪接
Cell. 1985 Apr;40(4):759-66. doi: 10.1016/0092-8674(85)90335-6.
5
Role of conserved sequence elements 9L and 2 in self-splicing of the Tetrahymena ribosomal RNA precursor.保守序列元件9L和2在嗜热四膜虫核糖体RNA前体自我剪接中的作用。
Cell. 1986 Apr 25;45(2):167-76. doi: 10.1016/0092-8674(86)90380-6.
6
Close relationship between certain nuclear and mitochondrial introns. Implications for the mechanism of RNA splicing.某些核内含子与线粒体内含子之间的密切关系。对RNA剪接机制的启示。
J Mol Biol. 1983 Jul 5;167(3):595-605. doi: 10.1016/s0022-2836(83)80100-4.
7
Self-splicing RNA and an RNA enzyme in Tetrahymena.嗜热四膜虫中的自我剪接RNA和一种RNA酶。
J Protozool. 1987 Nov;34(4):416-7. doi: 10.1111/j.1550-7408.1987.tb03204.x.
8
The intervening sequence in the 26S rRNA coding region of T. thermophila is transcribed within the largest stable precursor for rRNA.嗜热栖热菌26S rRNA编码区的间隔序列在rRNA最大的稳定前体中被转录。
Cell. 1979 Oct;18(2):525-32. doi: 10.1016/0092-8674(79)90069-2.
9
Phylogenetic evidence for the acquisition of ribosomal RNA introns subsequent to the divergence of some of the major Tetrahymena groups.一些主要四膜虫类群分化之后获得核糖体RNA内含子的系统发育证据。
EMBO J. 1986 Dec 20;5(13):3625-30. doi: 10.1002/j.1460-2075.1986.tb04691.x.
10
Mechanism of recognition of the 5' splice site in self-splicing group I introns.自我剪接I类内含子中5'剪接位点的识别机制。
Nature. 1986;322(6074):86-9. doi: 10.1038/322086a0.

引用本文的文献

1
Relationship of viroids and certain other plant pathogenic nucleic acids to group I and II introns.类病毒与某些其它植物病原核酸与 I 组和 II 组内含子的关系。
Plant Mol Biol. 1986 Mar;7(2):129-42. doi: 10.1007/BF00040139.
2
Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear-encoded members.两个内含子家族中RNA二级结构的保守性,包括线粒体、叶绿体和核编码成员。
EMBO J. 1983;2(1):33-8. doi: 10.1002/j.1460-2075.1983.tb01376.x.
3
P2 functions as a spacer in the Tetrahymena ribozyme.
P2在四膜虫核酶中起间隔序列的作用。
Nucleic Acids Res. 1994 Apr 25;22(8):1383-8. doi: 10.1093/nar/22.8.1383.
4
In vitro splicing of the ribosomal RNA precursor in isolated nucleoli from Tetrahymena.嗜热四膜虫分离核仁中核糖体RNA前体的体外剪接
Nucleic Acids Res. 1980 Dec 11;8(23):5551-66. doi: 10.1093/nar/8.23.5551.
5
The primary and secondary structure of yeast 26S rRNA.酵母26S核糖体RNA的一级和二级结构。
Nucleic Acids Res. 1981 Dec 21;9(24):6935-52. doi: 10.1093/nar/9.24.6935.
6
Two distinct intervening sequences in different ribosomal DNA repeat units of Sciara coprophila.嗜粪Sciara不同核糖体DNA重复单元中的两个不同间隔序列。
Nucleic Acids Res. 1981 Aug 11;9(15):3747-64. doi: 10.1093/nar/9.15.3747.
7
Secondary structure model for 23S ribosomal RNA.23S核糖体RNA的二级结构模型
Nucleic Acids Res. 1981 Nov 25;9(22):6167-89. doi: 10.1093/nar/9.22.6167.
8
The rRNA operon from Zea mays chloroplasts: nucleotide sequence of 23S rDNA and its homology with E.coli 23S rDNA.玉米叶绿体的核糖体RNA操纵子:23S核糖体DNA的核苷酸序列及其与大肠杆菌23S核糖体DNA的同源性。
Nucleic Acids Res. 1981 Jun 25;9(12):2853-69. doi: 10.1093/nar/9.12.2853.
9
Ribosomal DNA genes of Bombyx mori: a minor fraction of the repeating units contain insertions.家蚕核糖体DNA基因:重复单元中的一小部分含有插入序列。
Nucleic Acids Res. 1984 Jun 11;12(11):4703-13. doi: 10.1093/nar/12.11.4703.
10
Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences.嗜热四膜虫核糖体RNA间隔序列的二级结构:与真菌线粒体间隔序列的结构同源性。
Proc Natl Acad Sci U S A. 1983 Jul;80(13):3903-7. doi: 10.1073/pnas.80.13.3903.