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拟南芥线粒体中一个核糖体蛋白S14假基因被转录并编辑。

An rps14 pseudogene is transcribed and edited in Arabidopsis mitochondria.

作者信息

Brandt P, Unseld M, Eckert-Ossenkopp U, Brennicke A

机构信息

Institut für Genbiologische Forschung, Berlin, Germany.

出版信息

Curr Genet. 1993 Oct;24(4):330-6. doi: 10.1007/BF00336785.

DOI:10.1007/BF00336785
PMID:7916674
Abstract

Sequence analysis of the region upstream of the apocytochrome b (cob) gene in the Arabidopsis mitochondrial genome identifies an open reading frame with homology to ribosomal protein L5, (rpl5), and a pseudogene with similarity to ribosomal protein S14 (rps14) genes. Both cob and rpl5 genes have intact reading frames, but the rps14 homology is disrupted by a stop codon and a deleted nucleotide. The rpl5 gene, the rps14 pseudogene, and the cob gene are separated by one nucleotide and a 1604-nucleotide-long spacer respectively. A plastid-like tRNA(Ser) is encoded downstream from the cob gene. The entire region is transcribed into a 5-kb transcript, containing the rps14 pseudogene and the cob gene. Cob and rpl5 mRNAs are edited in several positions with different frequencies. The rps14 pseudogene is transcribed and edited in one position in common with other plants. Since no intact rps14 gene is found in the mitochondrial genome of Arabidopsis, the functional gene is presumably encoded in the nucleus.

摘要

对拟南芥线粒体基因组中脱辅基细胞色素b(cob)基因上游区域进行序列分析,鉴定出一个与核糖体蛋白L5(rpl5)具有同源性的开放阅读框,以及一个与核糖体蛋白S14(rps14)基因相似的假基因。cob和rpl5基因都有完整的阅读框,但rps14的同源性被一个终止密码子和一个缺失的核苷酸破坏。rpl5基因、rps14假基因和cob基因分别被一个核苷酸和一个1604个核苷酸长的间隔区隔开。一个类质体的tRNA(Ser)编码在cob基因的下游。整个区域转录成一个5 kb的转录本,包含rps14假基因和cob基因。Cob和rpl5的mRNA在几个位置以不同频率进行编辑。rps14假基因在一个位置转录并编辑,这与其他植物相同。由于在拟南芥的线粒体基因组中未发现完整的rps14基因,推测功能基因编码在细胞核中。

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本文引用的文献

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Plastid, nuclear and reverse transcriptase sequences in the mitochondrial genome of Oenothera: is genetic information transferred between organelles via RNA?月见草线粒体基因组中的质体、核和逆转录酶序列:遗传信息是否通过RNA在细胞器之间传递?
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Ribosomal protein S14 genes in broad bean mitochondrial DNA.
线粒体逆向加工促进了rpl5在禾本科植物中向细胞核的功能转移。
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Pervasive survival of expressed mitochondrial rps14 pseudogenes in grasses and their relatives for 80 million years following three functional transfers to the nucleus.在三次功能性转移至细胞核后,线粒体核糖体蛋白S14假基因在禾本科植物及其近缘物种中广泛存活了8000万年。
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Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella.线粒体基因从多种陆地植物供体大量水平转移至基部被子植物无油樟。
Proc Natl Acad Sci U S A. 2004 Dec 21;101(51):17747-52. doi: 10.1073/pnas.0408336102. Epub 2004 Dec 14.
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The rpl5- rps14 mitochondrial region: a hot spot for DNA rearrangements in Solanum spp. somatic hybrids.
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The complete nucleotide sequence and RNA editing content of the mitochondrial genome of rapeseed (Brassica napus L.): comparative analysis of the mitochondrial genomes of rapeseed and Arabidopsis thaliana.油菜(Brassica napus L.)线粒体基因组的完整核苷酸序列及RNA编辑内容:油菜与拟南芥线粒体基因组的比较分析
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A single nuclear transcript encoding mitochondrial RPS14 and SDHB of rice is processed by alternative splicing: common use of the same mitochondrial targeting signal for different proteins.一个编码水稻线粒体RPS14和SDHB的单细胞核转录本通过可变剪接进行加工:不同蛋白质对相同线粒体靶向信号的共同利用。
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4
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