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酿酒酵母二号染色体着丝粒周围的序列:CEN2与CEN4的相似性

Sequence around the centromere of Saccharomyces cerevisiae chromosome II: similarity of CEN2 to CEN4.

作者信息

Wolfe K H, Lohan A J

机构信息

Department of Genetics, University of Dublin, Trinity College, Ireland.

出版信息

Yeast. 1994 Apr;10 Suppl A:S41-6. doi: 10.1002/yea.320100006.

DOI:10.1002/yea.320100006
PMID:8091860
Abstract

We report the sequence of a 12 kilobase region spanning the centromere of Saccharomyces cerevisiae chromosome II. The sequence from the left arm includes genes for histones H2A and H2B. The sequence from the right arm includes a gene that probably encodes a novel trehalase, as well as the COQ1 gene (for an enzyme involved in coenzyme Q biosynthesis), and an open reading frame with significant similarity to bacterial genes of unknown function. The trehalase gene (YBR0106) on chromosome II is located beside the centromere and transcribed towards it. This is identical to the arrangement of the neutral trehalase gene (NTH1) beside the centromere of chromosome IV. The centromere regions of chromosomes II and IV may therefore have arisen through a duplication of the centromere region of an ancestral chromosome. The YBR0106 and NTH1 proteins are 77% identical in predicted amino acid sequence, but there is no pronounced sequence similarity between the two centromeres (CEN2 and CEN4) outside of the universally conserved CDE I and CDE III elements. The genes flanking the centromere and trehalase genes differ between the two chromosomes, so the similarity between chromosomes II and IV may be less extensive than that recently reported between chromosomes III and XIV.

摘要

我们报道了酿酒酵母二号染色体着丝粒区域一个12千碱基的序列。左臂的序列包含组蛋白H2A和H2B的基因。右臂的序列包含一个可能编码新型海藻糖酶的基因,以及COQ1基因(参与辅酶Q生物合成的一种酶),还有一个与功能未知的细菌基因有显著相似性的开放阅读框。二号染色体上的海藻糖酶基因(YBR0106)位于着丝粒旁边并朝着着丝粒转录。这与四号染色体着丝粒旁边的中性海藻糖酶基因(NTH1)的排列方式相同。因此,二号和四号染色体的着丝粒区域可能是通过一条祖先染色体着丝粒区域的重复产生的。YBR0106和NTH1蛋白在预测的氨基酸序列上有77%的同一性,但在普遍保守的CDE I和CDE III元件之外,两个着丝粒(CEN2和CEN4)之间没有明显的序列相似性。两条染色体上着丝粒两侧的基因以及海藻糖酶基因有所不同,所以二号和四号染色体之间的相似性可能不如最近报道的三号和十四号染色体之间的相似性那么广泛。

相似文献

1
Sequence around the centromere of Saccharomyces cerevisiae chromosome II: similarity of CEN2 to CEN4.酿酒酵母二号染色体着丝粒周围的序列:CEN2与CEN4的相似性
Yeast. 1994 Apr;10 Suppl A:S41-6. doi: 10.1002/yea.320100006.
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The complete sequence of a 33 kb fragment on the right arm of chromosome II from Saccharomyces cerevisiae reveals 16 open reading frames, including ten new open reading frames, five previously identified genes and a homologue of the SCO1 gene.来自酿酒酵母二号染色体右臂上一个33 kb片段的完整序列揭示了16个开放阅读框,其中包括10个新的开放阅读框、5个先前已鉴定的基因以及SCO1基因的一个同源物。
Yeast. 1994 Apr;10 Suppl A:S75-80. doi: 10.1002/yea.320100010.
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Yeast. 1993 Jul;9(7):797-806. doi: 10.1002/yea.320090714.
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Organization of the centromeric region of chromosome XIV in Saccharomyces cerevisiae.酿酒酵母中第十四号染色体着丝粒区域的组织
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Analysis of a 17.9 kb region from Saccharomyces cerevisiae chromosome VII reveals the presence of eight open reading frames, including BRF1 (TFIIIB70) and GCN5 genes.对酿酒酵母七号染色体上一个17.9 kb区域的分析表明,存在八个开放阅读框,包括BRF1(TFIIIB70)和GCN5基因。
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The complete sequence of a 6794 bp segment located on the right arm of chromosome II of Saccharomyces cerevisiae. Finding of a putative dUTPase in a yeast.位于酿酒酵母二号染色体右臂上一段6794碱基对片段的完整序列。在酵母中发现一种假定的dUTPase。
Yeast. 1993 Oct;9(10):1131-7. doi: 10.1002/yea.320091014.
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The complete sequence of a 10.8kb fragment to the right of the chromosome III centromere of Saccharomyces cerevisiae.酿酒酵母第三条染色体着丝粒右侧一个10.8kb片段的完整序列。
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Nucleotide sequence analysis of an 8887 bp region of the left arm of yeast chromosome XIV, encompassing the centromere sequence.对酵母十四号染色体左臂8887 bp区域进行核苷酸序列分析,该区域包含着丝粒序列。
Yeast. 1994 Jul;10(7):945-51. doi: 10.1002/yea.320100709.
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Twelve open reading frames revealed in the 23.6 kb segment flanking the centromere on the Saccharomyces cerevisiae chromosome XIV right arm.在酿酒酵母第十四号染色体右臂着丝粒侧翼的23.6 kb片段中发现了12个开放阅读框。
Yeast. 1994 Oct;10(10):1355-61. doi: 10.1002/yea.320101013.
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The sequence of an 8 kb segment on the left arm of chromosome II from Saccharomyces cerevisiae identifies five new open reading frames of unknown functions, two tRNA genes and two transposable elements.来自酿酒酵母二号染色体左臂上一个8 kb片段的序列鉴定出五个功能未知的新开放阅读框、两个tRNA基因和两个转座元件。
Yeast. 1992 Sep;8(9):777-85. doi: 10.1002/yea.320080911.

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