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反转录转座子Mys在白足鼠-鹿鼠复合体的进化过程中是活跃的。

Retrotransposon Mys was active during evolution of the Peromyscus leucopus-maniculatus complex.

作者信息

Lee R N, Jaskula J C, van den Bussche R A, Baker R J, Wichman H A

机构信息

Department of Biological Sciences, University of Idaho, Moscow 83844, USA.

出版信息

J Mol Evol. 1996 Jan;42(1):44-51. doi: 10.1007/BF00163210.

DOI:10.1007/BF00163210
PMID:8576963
Abstract

Mys is a retrovirus-like transposable element found throughout the genus Peromyscus. Several mys subfamilies identified on the basis of restriction site variation occur in more than one species. The distribution of these subfamilies is consistent with the accepted species phylogeny, suggesting that mys was present in the ancestor of Peromyscus and has been active through much of the evolution of this genus. Quantitative Southern blot analysis was used to examine the variability of subfamilies in P. leucopus and maniculatus. We found that subfamilies with phylogenetically narrow distributions were more variable in copy number both within and between species than subfamilies with a broader distribution. Taken together, our data suggest that mys has undergone multiple rounds of transposition since the peromyscine radiation, and that five subfamilies have been amplified during the evolution of the leucopus-maniculatus species complex.

摘要

Mys是一种在鹿鼠属中普遍存在的类似逆转录病毒的转座元件。基于限制性酶切位点变异鉴定出的几个Mys亚家族存在于多个物种中。这些亚家族的分布与公认的物种系统发育一致,表明Mys存在于鹿鼠属的祖先中,并且在该属的大部分进化过程中一直活跃。采用定量Southern印迹分析来检测白足鼠和鹿鼠中亚家族的变异性。我们发现,与分布较广的亚家族相比,系统发育分布较窄的亚家族在物种内和物种间的拷贝数变异更大。综合来看,我们的数据表明,自鹿鼠科辐射以来,Mys经历了多轮转座,并且在白足鼠 - 鹿鼠物种复合体的进化过程中,有五个亚家族得到了扩增。

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本文引用的文献

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RETROTRANSPOSON MYS IS CONCENTRATED ON THE SEX CHROMOSOMES: IMPLICATIONS FOR COPY NUMBER CONTAINMENT.逆转座子MYS集中于性染色体:对拷贝数控制的影响。
Evolution. 1990 Dec;44(8):2083-2088. doi: 10.1111/j.1558-5646.1990.tb04313.x.
2
Genome organization of repetitive elements in the rodent, Peromyscus leucopus.白足鼠(Peromyscus leucopus)中重复元件的基因组组织
Mamm Genome. 1993;4(7):374-81. doi: 10.1007/BF00360588.
3
Identification of a new, abundant superfamily of mammalian LTR-transposons.鉴定出一种新的、丰富的哺乳动物长末端重复序列转座子超家族。
MysTR:哺乳动物中的一个内源性逆转录病毒家族,其拷贝数最近正扩增至前所未有的数量。
J Virol. 2005 Dec;79(23):14698-707. doi: 10.1128/JVI.79.23.14698-14707.2005.
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Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha.在灵长目、啮齿目和兔形目动物基因组中鉴定新的中等重复频率重复序列。
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