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酵母蛋白质数据库(YPD):酿酒酵母的一个经过整理的蛋白质组数据库。

The Yeast Protein Database (YPD): a curated proteome database for Saccharomyces cerevisiae.

作者信息

Hodges P E, Payne W E, Garrels J I

机构信息

Proteome, Inc., 200 Cummings Center, Suite 425C, Beverly, MA 01915, USA.

出版信息

Nucleic Acids Res. 1998 Jan 1;26(1):68-72. doi: 10.1093/nar/26.1.68.

DOI:10.1093/nar/26.1.68
PMID:9399803
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC147175/
Abstract

The Yeast Protein Database (YPD) is a curated database for the proteome of Saccharomyces cerevisiae . It consists of approximately 6000 Yeast Protein Reports, one for each of the known or predicted yeast proteins. Each Yeast Protein Report is a one-page presentation of protein properties, annotation lines that summarize findings from the literature, and references. In the past year, the number of annotation lines has grown from 25 000 to approximately 35 000, and the number of articles curated has grown from approximately 3500 to >5000. Recently, new data types have been included in YPD: protein-protein interactions, genetic interactions, and regulators of gene expression. Finally, a new layer of information, the YPD Protein Minireviews, has recently been introduced. The Yeast Protein Database can be found on the Web at http://www.proteome.com/YPDhome. html

摘要

酵母蛋白质数据库(YPD)是一个经过整理的酿酒酵母蛋白质组数据库。它包含大约6000份酵母蛋白质报告,每份报告对应一种已知或预测的酵母蛋白质。每份酵母蛋白质报告都用一页展示了蛋白质特性、总结文献研究结果的注释行以及参考文献。在过去一年里,注释行数量从25000条增加到了约35000条,整理的文章数量从约3500篇增加到了超过5000篇。最近,YPD纳入了新的数据类型:蛋白质-蛋白质相互作用、遗传相互作用以及基因表达调控因子。最后,最近引入了一层新的信息——YPD蛋白质简短综述。可通过网址http://www.proteome.com/YPDhome.html在网上找到酵母蛋白质数据库。

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The Yeast Protein Database (YPD): a curated proteome database for Saccharomyces cerevisiae.酵母蛋白质数据库(YPD):酿酒酵母的一个经过整理的蛋白质组数据库。
Nucleic Acids Res. 1998 Jan 1;26(1):68-72. doi: 10.1093/nar/26.1.68.
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本文引用的文献

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Proteome studies of Saccharomyces cerevisiae: identification and characterization of abundant proteins.酿酒酵母的蛋白质组研究:丰富蛋白质的鉴定与表征
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Toward a functional analysis of the yeast genome through exhaustive two-hybrid screens.通过全面的双杂交筛选对酵母基因组进行功能分析。
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The protein kinases of budding yeast: six score and more.芽殖酵母的蛋白激酶:一百二十多个及更多。
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Yeast Protein database (YPD): a database for the complete proteome of Saccharomyces cerevisiae.酵母蛋白质数据库(YPD):一个关于酿酒酵母完整蛋白质组的数据库。
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Life with 6000 genes.拥有6000个基因的生命。
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