• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

原核生物多肽释放因子2中的单个氨基酸取代使其能够在所有三个终止密码子处终止翻译。

Single amino acid substitution in prokaryote polypeptide release factor 2 permits it to terminate translation at all three stop codons.

作者信息

Ito K, Uno M, Nakamura Y

机构信息

Department of Tumor Biology, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108, Japan.

出版信息

Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):8165-9. doi: 10.1073/pnas.95.14.8165.

DOI:10.1073/pnas.95.14.8165
PMID:9653158
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC20947/
Abstract

Prokaryotic translational release factors, RF1 and RF2, catalyze polypeptide release at UAG/UAA and UGA/UAA stop codons, respectively. In this study, we isolated a bacterial RF2 mutant (RF2*) containing an E167K substitution that restored the growth of a temperature-sensitive RF1 strain of Escherichia coli and the viability of a chromosomal RF1/RF2 double knockout. In both in vivo and in vitro polypeptide termination assays, RF2* catalyzed UAG/UAA termination, as does RF1, as well as UGA termination, showing that RF2* acquired omnipotent release activity. This result suggests that the E167K mutation abolished the putative third-base discriminator function of RF2. These findings are interpreted as indicating that prokaryotic and eukaryotic release factors share the same anticodon moiety and that only one omnipotent release factor is sufficient for bacterial growth, similar to the eukaryotic single omnipotent factor.

摘要

原核生物翻译释放因子RF1和RF2分别在UAG/UAA和UGA/UAA终止密码子处催化多肽释放。在本研究中,我们分离出一种细菌RF2突变体(RF2*),其含有E167K取代,该取代恢复了大肠杆菌温度敏感型RF1菌株的生长以及染色体RF1/RF2双敲除菌株的活力。在体内和体外多肽终止试验中,RF2与RF1一样催化UAG/UAA终止,以及UGA终止,表明RF2获得了全能释放活性。这一结果表明E167K突变消除了RF2假定的第三碱基识别功能。这些发现被解释为表明原核生物和真核生物释放因子共享相同的反密码子部分,并且类似于真核生物的单一全能因子,仅一个全能释放因子就足以支持细菌生长。

相似文献

1
Single amino acid substitution in prokaryote polypeptide release factor 2 permits it to terminate translation at all three stop codons.原核生物多肽释放因子2中的单个氨基酸取代使其能够在所有三个终止密码子处终止翻译。
Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):8165-9. doi: 10.1073/pnas.95.14.8165.
2
A tripeptide 'anticodon' deciphers stop codons in messenger RNA.一种三肽“反密码子”可解读信使核糖核酸中的终止密码子。
Nature. 2000 Feb 10;403(6770):680-4. doi: 10.1038/35001115.
3
Coevolution between Stop Codon Usage and Release Factors in Bacterial Species.细菌物种中终止密码子使用与释放因子之间的协同进化
Mol Biol Evol. 2016 Sep;33(9):2357-67. doi: 10.1093/molbev/msw107. Epub 2016 Jun 13.
4
Amber (UAG) suppressors affected in UGA/UAA-specific polypeptide release factor 2 of bacteria: genetic prediction of initial binding to ribosome preceding stop codon recognition.影响细菌UGA/UAA特异性多肽释放因子2的琥珀色(UAG)抑制因子:在终止密码子识别之前与核糖体初始结合的遗传预测。
Genes Cells. 1999 May;4(5):253-66. doi: 10.1046/j.1365-2443.1999.00260.x.
5
R213I mutation in release factor 2 (RF2) is one step forward for engineering an omnipotent release factor in bacteria .释放因子2(RF2)中的R213I突变是在细菌中构建全能释放因子方面向前迈出的一步。
J Biol Chem. 2017 Sep 8;292(36):15134-15142. doi: 10.1074/jbc.M117.785238. Epub 2017 Jul 25.
6
Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo.细菌释放因子RF1和RF2的甲基化是体内正常翻译终止所必需的。
J Biol Chem. 2007 Dec 7;282(49):35638-45. doi: 10.1074/jbc.M706076200. Epub 2007 Oct 10.
7
Ribosomal protein L11 mutations in two functional domains equally affect release factors 1 and 2 activity.核糖体蛋白L11两个功能域中的突变同样影响释放因子1和2的活性。
Mol Microbiol. 2006 Apr;60(1):108-20. doi: 10.1111/j.1365-2958.2006.05094.x.
8
Global analysis of translation termination in E. coli.大肠杆菌中翻译终止的全局分析。
PLoS Genet. 2017 Mar 16;13(3):e1006676. doi: 10.1371/journal.pgen.1006676. eCollection 2017 Mar.
9
Functional interaction between release factor one and P-site peptidyl-tRNA on the ribosome.释放因子1与核糖体P位点肽基-tRNA之间的功能相互作用。
J Mol Biol. 1996 Aug 16;261(2):98-107. doi: 10.1006/jmbi.1996.0444.
10
Stop codon recognition and interactions with peptide release factor RF3 of truncated and chimeric RF1 and RF2 from Escherichia coli.来自大肠杆菌的截短型和嵌合型RF1及RF2的终止密码子识别以及与肽释放因子RF3的相互作用。
Mol Microbiol. 2003 Dec;50(5):1467-76. doi: 10.1046/j.1365-2958.2003.03799.x.

引用本文的文献

1
Collateral Toxicity Limits the Evolution of Bacterial Release Factor 2 toward Total Omnipotence.旁系毒性限制了细菌释放因子 2 向全能性进化。
Mol Biol Evol. 2020 Oct 1;37(10):2918-2930. doi: 10.1093/molbev/msaa129.
2
Decoding on the ribosome depends on the structure of the mRNA phosphodiester backbone.核糖体上的解码依赖于 mRNA 磷酸二酯骨架的结构。
Proc Natl Acad Sci U S A. 2018 Jul 17;115(29):E6731-E6740. doi: 10.1073/pnas.1721431115. Epub 2018 Jul 2.
3
Atomic mutagenesis of stop codon nucleotides reveals the chemical prerequisites for release factor-mediated peptide release.终止密码子核苷酸的原子诱变揭示了释放因子介导的肽释放的化学前提条件。
Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E382-E389. doi: 10.1073/pnas.1714554115. Epub 2018 Jan 3.
4
Functional Constraints on Replacing an Essential Gene with Its Ancient and Modern Homologs.用其古代和现代同源基因替换必需基因的功能限制。
mBio. 2017 Aug 29;8(4):e01276-17. doi: 10.1128/mBio.01276-17.
5
R213I mutation in release factor 2 (RF2) is one step forward for engineering an omnipotent release factor in bacteria .释放因子2(RF2)中的R213I突变是在细菌中构建全能释放因子方面向前迈出的一步。
J Biol Chem. 2017 Sep 8;292(36):15134-15142. doi: 10.1074/jbc.M117.785238. Epub 2017 Jul 25.
6
Rewriting the Genetic Code.改写遗传密码。
Annu Rev Microbiol. 2017 Sep 8;71:557-577. doi: 10.1146/annurev-micro-090816-093247. Epub 2017 Jul 11.
7
Experimental Evolution of Escherichia coli Harboring an Ancient Translation Protein.携带古老翻译蛋白的大肠杆菌的实验进化
J Mol Evol. 2017 Mar;84(2-3):69-84. doi: 10.1007/s00239-017-9781-0. Epub 2017 Feb 23.
8
Peptide release promoted by methylated RF2 and ArfA in nonstop translation is achieved by an induced-fit mechanism.在无义介导的翻译中,甲基化的RF2和ArfA促进的肽释放是通过诱导契合机制实现的。
RNA. 2016 Jan;22(1):49-60. doi: 10.1261/rna.053082.115. Epub 2015 Nov 9.
9
Overcoming Challenges in Engineering the Genetic Code.克服遗传密码工程中的挑战。
J Mol Biol. 2016 Feb 27;428(5 Pt B):1004-21. doi: 10.1016/j.jmb.2015.09.003. Epub 2015 Sep 5.
10
Highly reproductive Escherichia coli cells with no specific assignment to the UAG codon.具有高度繁殖能力的大肠杆菌细胞,对UAG密码子没有特定的分配。
Sci Rep. 2015 May 18;5:9699. doi: 10.1038/srep09699.

本文引用的文献

1
The hydrogen hypothesis for the first eukaryote.关于首个真核生物的氢假说。
Nature. 1998 Mar 5;392(6671):37-41. doi: 10.1038/32096.
2
The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.嗜热硫酸盐还原古菌富氏古球菌的全基因组序列。
Nature. 1997 Nov 27;390(6658):364-70. doi: 10.1038/37052.
3
Cloning and overexpression of polypeptide release factor 1 of Thermus thermophilus.嗜热栖热菌多肽释放因子1的克隆与过表达
Biochimie. 1997 May;79(5):287-92. doi: 10.1016/s0300-9084(97)83516-x.
4
Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2.细菌释放因子2的tRNA模拟结构域中第246位氨基酸的功能特异性
Biochimie. 1996;78(11-12):935-43. doi: 10.1016/s0300-9084(97)86715-6.
5
Emerging understanding of translation termination.对翻译终止的新认识。
Cell. 1996 Oct 18;87(2):147-50. doi: 10.1016/s0092-8674(00)81331-8.
6
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.产甲烷古菌詹氏甲烷球菌的全基因组序列
Science. 1996 Aug 23;273(5278):1058-73. doi: 10.1126/science.273.5278.1058.
7
Conserved motifs in prokaryotic and eukaryotic polypeptide release factors: tRNA-protein mimicry hypothesis.原核生物和真核生物多肽释放因子中的保守基序:tRNA-蛋白质模拟假说。
Proc Natl Acad Sci U S A. 1996 May 28;93(11):5443-8. doi: 10.1073/pnas.93.11.5443.
8
Suppression of temperature-sensitive defects of polypeptide release factors RF-1 and RF-2 by mutations or by an excess of RF-3 in Escherichia coli.大肠杆菌中通过突变或过量的RF-3抑制多肽释放因子RF-1和RF-2的温度敏感缺陷。
J Mol Biol. 1996 May 17;258(4):588-99. doi: 10.1006/jmbi.1996.0271.
9
UGA codon context which spans three codons. Reversal by ms2i6A37 in tRNA, mutation in rpsD(S4) or streptomycin.跨越三个密码子的UGA密码子上下文。tRNA中ms2i6A37导致的反转、rpsD(S4)中的突变或链霉素。
J Mol Biol. 1993 Aug 20;232(4):1017-29. doi: 10.1006/jmbi.1993.1457.
10
The second to last amino acid in the nascent peptide as a codon context determinant.新生肽中倒数第二个氨基酸作为密码子上下文决定因素。
EMBO J. 1994 Jan 1;13(1):249-57. doi: 10.1002/j.1460-2075.1994.tb06255.x.