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A complete genome assembly of Glaciecola mesophila sp. nov. sequenced by using BIGIS-4 sequencer system.采用 BIGIS-4 测序系统对嗜冷糖蜜菌 Glaciecola mesophila sp. nov. 进行全基因组序列测定。
Sci China Life Sci. 2011 Sep;54(9):835-40. doi: 10.1007/s11427-011-4211-9. Epub 2011 Aug 1.
2
Complete genome sequence of the marine cellulose- and xylan-degrading bacterium Glaciecola sp. strain 4H-3-7+YE-5.海洋纤维素和木聚糖降解菌 Glaciecola sp. 菌株 4H-3-7+YE-5 的全基因组序列。
J Bacteriol. 2011 Sep;193(17):4547-8. doi: 10.1128/JB.05468-11. Epub 2011 Jun 24.
3
Glaciecola arctica sp. nov., isolated from Arctic marine sediment.北极冰缘海单胞菌,从北极海洋沉积物中分离得到。
Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2338-2341. doi: 10.1099/ijs.0.027326-0. Epub 2010 Oct 29.
4
De novo assembly of human genomes with massively parallel short read sequencing.利用大规模平行短读测序进行人类基因组从头组装。
Genome Res. 2010 Feb;20(2):265-72. doi: 10.1101/gr.097261.109. Epub 2009 Dec 17.
5
Glaciecola lipolytica sp. nov., isolated from seawater near Tianjin city, China.解脂嗜冷杆菌新种,从中国天津市附近的海水中分离得到。
Int J Syst Evol Microbiol. 2009 Jan;59(Pt 1):73-6. doi: 10.1099/ijs.0.000489-0.
6
Responses of microbial communities in Arctic sea ice after contamination by crude petroleum oil.北极海冰微生物群落受原油污染后的响应
Microb Ecol. 2008 Apr;55(3):540-52. doi: 10.1007/s00248-007-9299-x. Epub 2007 Sep 6.
7
Glaciecola agarilytica sp. nov., an agar-digesting marine bacterium from the East Sea, Korea.嗜琼脂冰川杆菌新种,一种来自韩国东海的可消化琼脂的海洋细菌。
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Identifying bacterial genes and endosymbiont DNA with Glimmer.使用Glimmer识别细菌基因和内共生体DNA。
Bioinformatics. 2007 Mar 15;23(6):673-9. doi: 10.1093/bioinformatics/btm009. Epub 2007 Jan 19.
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Glaciecola chathamensis sp. nov., a novel marine polysaccharide-producing bacterium.新种查塔姆冰川菌(Glaciecola chathamensis sp. nov.),一种新型产海洋多糖细菌。
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10
Glaciecola psychrophila sp. nov., a novel psychrophilic bacterium isolated from the Arctic.嗜冷冰川菌新种,一种从北极分离出的新型嗜冷细菌。
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海水菌 Glaciecola nitratireducens FR1064(T) 的全基因组序列。

Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064(T).

机构信息

State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Jinan 250100, China.

出版信息

J Bacteriol. 2011 Dec;193(24):7006-7. doi: 10.1128/JB.06296-11.

DOI:10.1128/JB.06296-11
PMID:22123761
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3232840/
Abstract

Glaciecola nitratireducens strain FR1064(T) was isolated from seawater and described as a new species by Baik et al. in 2006. The genome size is about 1.01 to 1.26 Mb smaller than two reported Glaciecola genomes, indicating the gain or loss of large genome segments in the evolution of Glaciecola strains.

摘要

由 Baik 等人于 2006 年从海水中分离得到的硝氮还原冰杆菌 FR1064(T)菌株,被描述为一个新物种。其基因组大小比已报道的两个冰杆菌基因组小约 1.01 至 1.26Mb,表明在冰杆菌菌株的进化过程中发生了大片段基因组的获得或丢失。