Van Trappen Stefanie, Tan Tjhing-Lok, Yang Jifang, Mergaert Joris, Swings Jean
Laboratorium voor Microbiologie, Vakgroep Biochemie, Fysiologie en Microbiologie, Universiteit Gent, Gent, Belgium.
Alfred-Wegener-Institut für Polar- und Meeresforschung, Bremerhaven, Germany.
Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1765-1771. doi: 10.1099/ijs.0.63123-0.
Four strains of cold-adapted, strictly aerobic and facultative oligotrophic bacteria were isolated from polar seas and investigated using a polyphasic taxonomic approach. Two strains (LMG 21857T and LMG 21854) derive from Arctic sea water whereas the other two strains (LMG 21855 and LMG 21858) were isolated from Antarctic sea water. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these strains belong to the gamma-subclass of the Proteobacteria and are related to the genus Glaciecola, with 98.0-99.7 % sequence similarity to Glaciecola mesophila and 94.2-95.3 % sequence similarity to Glaciecola punicea, their nearest phylogenetic neighbours. Two strains (LMG 21855 and LMG 21858) were identified as G. mesophila, whereas DNA-DNA hybridization results and differences in phenotypic characteristics showed that the other two strains (LMG 21857T and LMG 21854) constitute a novel species within the genus Glaciecola, with a DNA G + C content of 44.0 mol%. The isolates are Gram-negative, chemoheterotrophic, motile, rod-shaped cells that are psychrotolerant and moderately halophilic. Buds can be produced on mother cells and on prosthecae. Branch formation of prosthecae occurs. Whole-cell fatty acid profiles of the isolates are very similar and include C(16 : 0) and C(16 : 1)omega7c as the major fatty acid components. On the basis of genotypic and phenotypic properties, a novel species of the genus Glaciecola is described, for which the name Glaciecola polaris sp. nov. is proposed, with isolate LMG 21857T (= CIP 108324T = ARK 150T) as the type strain. An emended description of the genus Glaciecola is presented.
从极地海洋中分离出四株适应低温、严格需氧且兼性贫营养的细菌,并采用多相分类学方法对其进行研究。两株菌(LMG 21857T和LMG 21854)分离自北极海水,另外两株菌(LMG 21855和LMG 21858)则分离自南极海水。基于16S rRNA基因序列的系统发育分析表明,这些菌株属于变形菌门的γ-亚纲,与嗜冷杆菌属相关,与嗜中温嗜冷杆菌的序列相似性为98.0 - 99.7%,与深红嗜冷杆菌的序列相似性为94.2 - 95.3%,它们是最近的系统发育邻属。两株菌(LMG 21855和LMG 21858)被鉴定为嗜中温嗜冷杆菌,而DNA - DNA杂交结果和表型特征差异表明,另外两株菌(LMG 21857T和LMG 21854)构成嗜冷杆菌属内的一个新物种,DNA G + C含量为44.0 mol%。分离菌株为革兰氏阴性、化能异养、运动性、杆状细胞,具有耐冷性和中度嗜盐性。母细胞和柄上可产生芽孢。柄上会发生分支形成。分离菌株的全细胞脂肪酸谱非常相似,主要脂肪酸成分包括C(16 : 0)和C(16 : 1)ω7c。基于基因型和表型特征,描述了嗜冷杆菌属的一个新物种,提议将其命名为极地嗜冷杆菌(Glaciecola polaris sp. nov.),以分离菌株LMG 21857T(= CIP 108324T = ARK 150T)作为模式菌株。还给出了嗜冷杆菌属的修订描述。