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鼠书:一个整合的小鼠资源门户。

MouseBook: an integrated portal of mouse resources.

机构信息

MRC Harwell, Mammalian Genetics Unit and the Mary Lyon Centre, Harwell Science and Innovation Campus, Oxfordshire OX11 0RD, UK.

出版信息

Nucleic Acids Res. 2010 Jan;38(Database issue):D593-9. doi: 10.1093/nar/gkp867. Epub 2009 Oct 23.

Abstract

The MouseBook (http://www.mousebook.org) databases and web portal provide access to information about mutant mouse lines held as live or cryopreserved stocks at MRC Harwell. The MouseBook portal integrates curated information from the MRC Harwell stock resource, and other Harwell databases, with information from external data resources to provide value-added information above and beyond what is available through other routes such as International Mouse Stain Resource (IMSR). MouseBook can be searched either using an intuitive Google style free text search or using the Mammalian Phenotype (MP) ontology tree structure. Text searches can be on gene, allele, strain identifier (e.g. MGI ID) or phenotype term and are assisted by automatic recognition of term types and autocompletion of gene and allele names covered by the database. Results are returned in a tabbed format providing categorized results identified from each of the catalogs in MouseBook. Individual result lines from each catalog include information on gene, allele, chromosomal location and phenotype, and provide a simple click-through link to further information as well as ordering the strain. The infrastructure underlying MouseBook has been designed to be extensible, allowing additional data sources to be added and enabling other sites to make their data directly available through MouseBook.

摘要

《鼠书》(http://www.mousebook.org)数据库和网络门户提供了访问 MRC 哈威尔活存或冷冻保存的突变鼠系的信息。《鼠书》门户整合了 MRC 哈威尔资源的精心整理的信息,以及其他哈威尔数据库的信息,以及来自外部数据资源的信息,提供了超出其他途径(如国际鼠基因资源库(IMSR))的增值信息。可以使用直观的 Google 风格的自由文本搜索,也可以使用哺乳动物表型(MP)本体树结构来搜索《鼠书》。文本搜索可以针对基因、等位基因、品系标识符(例如 MGI ID)或表型术语进行,并且通过自动识别术语类型和自动完成数据库涵盖的基因和等位基因名称来辅助。结果以选项卡格式返回,提供了从《鼠书》每个目录中识别的分类结果。每个目录的各个结果行都包含基因、等位基因、染色体位置和表型的信息,并提供了一个简单的点击链接,以获取进一步的信息以及订购品系。《鼠书》的基础架构设计为可扩展,允许添加其他数据源,并使其他站点能够通过《鼠书》直接提供其数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9ff/2808969/570171f6a87b/gkp867f1.jpg

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