Microbial Pathogenicity Laboratory, Department of Microbiology, University of Delhi South Campus, Benito Juarez Road, New Delhi 110 021, India.
BMC Microbiol. 2010 May 28;10:158. doi: 10.1186/1471-2180-10-158.
Genetic relationships among 81 strains of Y. enterocolitica biovar 1A isolated from clinical and non-clinical sources were discerned by multilocus enzyme electrophoresis (MLEE) and multilocus restriction typing (MLRT) using six loci each. Such studies may reveal associations between the genotypes of the strains and their sources of isolation.
All loci were polymorphic and generated 62 electrophoretic types (ETs) and 12 restriction types (RTs). The mean genetic diversity (H) of the strains by MLEE and MLRT was 0.566 and 0.441 respectively. MLEE (DI = 0.98) was more discriminatory and clustered Y. enterocolitica biovar 1A strains into four groups, while MLRT (DI = 0.77) identified two distinct groups. BURST (Based Upon Related Sequence Types) analysis of the MLRT data suggested aquatic serotype O:6,30-6,31 isolates to be the ancestral strains from which, clinical O:6,30-6,31 strains might have originated by host adaptation and genetic change.
MLEE revealed greater genetic diversity among strains of Y. enterocolitica biovar 1A and clustered strains in four groups, while MLRT grouped the strains into two groups. BURST analysis of MLRT data nevertheless provided newer insights into the probable evolution of clinical strains from aquatic strains.
通过多基因座酶电泳(MLEE)和多基因座限制分型(MLRT)在六个基因座中使用每个基因座,鉴定了 81 株来自临床和非临床来源的肠耶尔森氏菌 1A 生物型的遗传关系。此类研究可能揭示菌株的基因型与其分离源之间的关联。
所有基因座均具有多态性,产生了 62 种电泳型(ET)和 12 种限制型(RT)。MLEE 和 MLRT 菌株的平均遗传多样性(H)分别为 0.566 和 0.441。MLEE(DI = 0.98)更具区分性,并将肠耶尔森氏菌 1A 生物型菌株聚类为四个组,而 MLRT(DI = 0.77)则鉴定出两个不同的组。MLRT 数据的 BURST(基于相关序列类型)分析表明,水生血清型 O:6,30-6,31 分离株是祖先菌株,临床 O:6,30-6,31 菌株可能通过宿主适应和遗传变化起源于此。
MLEE 揭示了肠耶尔森氏菌 1A 生物型菌株之间更大的遗传多样性,并将菌株聚类为四个组,而 MLRT 将菌株聚类为两个组。然而,MLRT 数据的 BURST 分析为临床菌株可能从水生菌株进化提供了新的见解。