• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

棒状链霉菌的基因组挖掘:两种新型隐秘倍半萜合酶的表达及生化特性分析

Genome mining in Streptomyces clavuligerus: expression and biochemical characterization of two new cryptic sesquiterpene synthases.

作者信息

Hu Yunfeng, Chou Wayne K W, Hopson Russell, Cane David E

机构信息

Department of Chemistry, Brown University, Box H, Providence, RI 02912-9108, USA.

出版信息

Chem Biol. 2011 Jan 28;18(1):32-7. doi: 10.1016/j.chembiol.2010.11.008.

DOI:10.1016/j.chembiol.2010.11.008
PMID:21276937
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3034312/
Abstract

Two presumptive terpene synthases of unknown biochemical function encoded by the sscg_02150 and sscg_03688 genes of Streptomyces clavuligerus ATCC 27074 were individually expressed in Escherichia coli as N-terminal-His₆-tag proteins, using codon-optimized synthetic genes. Incubation of recombinant SSCG_02150 with farnesyl diphosphate (1, FPP) gave (-)-δ-cadinene (2) while recombinant SSCG_03688 converted FPP to (+)-T-muurolol (3). Individual incubations of (-)-δ-cadinene synthase with [1,1-²H₂]FPP (1a), (1S)-[1-²H]-FPP (1b), and (1R)-[1-²H]-FPP (1c) and NMR analysis of the resulting samples of deuterated (-)-δ-cadinene supported a cyclization mechanism involving the intermediacy of nerolidyl diphosphate (4) leading to a helminthogermacradienyl cation 5. Following a 1,3-hydride shift of the original H-1(si) of FPP, cyclization and deprotonation will give (-)-δ-cadinene. Similar incubations with recombinant SSCG_03688 supported an analogous mechanism for the formation of (+)-T-muurolol (3), also involving a 1,3-hydride shift of the original H-1(si) of FPP.

摘要

利用密码子优化的合成基因,将来自克拉维链霉菌ATCC 27074的sscg_02150和sscg_03688基因编码的两个生化功能未知的假定萜烯合酶分别作为N端带有His₆标签的蛋白在大肠杆菌中表达。重组的SSCG_02150与法尼基二磷酸(1,FPP)孵育产生(-)-δ-杜松烯(2),而重组的SSCG_03688将FPP转化为(+)-T-穆罗醇(3)。将(-)-δ-杜松烯合酶分别与[1,1-²H₂]FPP(1a)、(1S)-[1-²H]-FPP(1b)和(1R)-[1-²H]-FPP(1c)孵育,并对所得的氘代(-)-δ-杜松烯样品进行NMR分析,支持了一种环化机制,该机制涉及橙花叔基二磷酸(4)中间体,生成蠕孢二烯基阳离子5。FPP原来的H-1(si)发生1,3-氢迁移后,环化和去质子化将产生(-)-δ-杜松烯。对重组的SSCG_03688进行类似的孵育,支持了(+)-T-穆罗醇(3)形成的类似机制,该机制也涉及FPP原来的H-1(si)的1,3-氢迁移。

相似文献

1
Genome mining in Streptomyces clavuligerus: expression and biochemical characterization of two new cryptic sesquiterpene synthases.棒状链霉菌的基因组挖掘:两种新型隐秘倍半萜合酶的表达及生化特性分析
Chem Biol. 2011 Jan 28;18(1):32-7. doi: 10.1016/j.chembiol.2010.11.008.
2
Genome mining in Streptomyces avermitilis: cloning and characterization of SAV_76, the synthase for a new sesquiterpene, avermitilol.链霉菌属阿佛曼链霉菌的基因组挖掘:新型倍半萜烯avermitilol 的合成酶 SAV_76 的克隆和特性研究。
J Am Chem Soc. 2010 Jul 7;132(26):8850-1. doi: 10.1021/ja103087w.
3
Genome mining in Streptomyces coelicolor: molecular cloning and characterization of a new sesquiterpene synthase.天蓝色链霉菌中的基因组挖掘:一种新型倍半萜合酶的分子克隆与表征
J Am Chem Soc. 2006 May 10;128(18):6022-3. doi: 10.1021/ja061292s.
4
Mechanism and stereochemistry of the germacradienol/germacrene D synthase of Streptomyces coelicolor A3(2).天蓝色链霉菌A3(2)的吉马烯二醇/吉马烯D合酶的作用机制和立体化学
J Am Chem Soc. 2004 Mar 10;126(9):2678-9. doi: 10.1021/ja039929k.
5
Geosmin biosynthesis. Streptomyces coelicolor germacradienol/germacrene D synthase converts farnesyl diphosphate to geosmin.土臭素的生物合成。天蓝色链霉菌的牻牛儿基牻牛儿醇/法尼基二磷酸合酶将法尼基二磷酸转化为土臭素。
J Am Chem Soc. 2006 Jun 28;128(25):8128-9. doi: 10.1021/ja062669x.
6
A 1,6-ring closure mechanism for (+)-δ-cadinene synthase?(+)-δ-杜松烯合酶的 1,6-环闭合机制?
J Am Chem Soc. 2012 Apr 4;134(13):5900-8. doi: 10.1021/ja211820p. Epub 2012 Mar 19.
7
Amorpha-4,11-diene synthase: mechanism and stereochemistry of the enzymatic cyclization of farnesyl diphosphate.紫穗槐-4,11-二烯合酶:法尼基二磷酸酶促环化反应的机制与立体化学
Arch Biochem Biophys. 2006 Apr 15;448(1-2):150-5. doi: 10.1016/j.abb.2005.07.015. Epub 2005 Aug 11.
8
Sesquiterpene Synthase-Catalyzed Conversion of a Farnesyl Diphosphate Analogue to a Nonnatural Terpenoid Ether.倍半萜合酶催化法呢基二磷酸类似物转化为非天然萜类醚
Methods Enzymol. 2018;608:83-95. doi: 10.1016/bs.mie.2018.05.004. Epub 2018 Jul 6.
9
Mechanisms of the Diterpene Cyclases β-Pinacene Synthase from Dictyostelium discoideum and Hydropyrene Synthase from Streptomyces clavuligerus.盘基网柄菌的二萜环化酶β-蒎烯合酶和棒状链霉菌的氢化芘合酶的作用机制。
Chemistry. 2017 Aug 4;23(44):10501-10505. doi: 10.1002/chem.201702704. Epub 2017 Jul 11.
10
Metabolic engineering of sesquiterpene metabolism in yeast.酵母中倍半萜代谢的代谢工程
Biotechnol Bioeng. 2007 May 1;97(1):170-81. doi: 10.1002/bit.21216.

引用本文的文献

1
Functional characterisation of twelve terpene synthases from actinobacteria.来自放线菌的十二种萜类合酶的功能表征
Beilstein J Org Chem. 2023 Sep 15;19:1386-1398. doi: 10.3762/bjoc.19.100. eCollection 2023.
2
Actinomycetes as Producers of Biologically Active Terpenoids: Current Trends and Patents.作为生物活性萜类化合物生产者的放线菌:当前趋势与专利
Pharmaceuticals (Basel). 2023 Jun 12;16(6):872. doi: 10.3390/ph16060872.
3
Recently Discovered Secondary Metabolites from Species.从 物种中发现的新次级代谢产物。

本文引用的文献

1
The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways.1.8 兆碱基的细菌线性质粒序列揭示了次级代谢途径的丰富进化资源库。
Genome Biol Evol. 2010 Jul 12;2:212-24. doi: 10.1093/gbe/evq013.
2
Natural products version 2.0: connecting genes to molecules.天然产物 2.0 版:将基因与分子联系起来。
J Am Chem Soc. 2010 Mar 3;132(8):2469-93. doi: 10.1021/ja909118a.
3
New natural product biosynthetic chemistry discovered by genome mining.通过基因组挖掘发现的新天然产物生物合成化学。
Molecules. 2022 Jan 28;27(3):887. doi: 10.3390/molecules27030887.
4
Streptomyces clavuligerus: The Omics Era.解旋酶: 组学时代。
J Ind Microbiol Biotechnol. 2021 Dec 23;48(9-10). doi: 10.1093/jimb/kuab072.
5
Functional Switch and Ethyl Group Formation in the Bacterial Polytrichastrene Synthase from Chryseobacterium polytrichastri.来自黄杆菌的细菌多曲松合酶中的功能转换和乙基基团形成。
Angew Chem Int Ed Engl. 2021 Sep 13;60(38):20781-20785. doi: 10.1002/anie.202109465. Epub 2021 Aug 13.
6
Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.戊烯烯合成酶中反 Markovnikov 加成反应的作用机制。
Biochemistry. 2020 Sep 8;59(35):3271-3283. doi: 10.1021/acs.biochem.0c00518. Epub 2020 Aug 18.
7
Current understanding and biotechnological application of the bacterial diterpene synthase CotB2.细菌二萜合酶CotB2的当前认识与生物技术应用
Beilstein J Org Chem. 2019 Oct 2;15:2355-2368. doi: 10.3762/bjoc.15.228. eCollection 2019.
8
Genome mining in J1-030: discovery and identification of novel sesquiterpene synthase and its products.对J1-030进行基因组挖掘:新型倍半萜合酶及其产物的发现与鉴定
Beilstein J Org Chem. 2019 Aug 28;15:2052-2058. doi: 10.3762/bjoc.15.202. eCollection 2019.
9
Mechanistic investigations on multiproduct β-himachalene synthase from .来自……的多产物β-雪松烯合酶的机制研究
Beilstein J Org Chem. 2019 May 2;15:1008-1019. doi: 10.3762/bjoc.15.99. eCollection 2019.
10
Stereochemical investigations on the biosynthesis of achiral ()-γ-bisabolene in .关于[具体生物中]非手性()-γ-红没药烯生物合成的立体化学研究。 (注:原文中“in.”后面缺少具体生物信息)
Beilstein J Org Chem. 2019 Mar 27;15:789-794. doi: 10.3762/bjoc.15.75. eCollection 2019.
Nat Prod Rep. 2009 Aug;26(8):977-86. doi: 10.1039/b713024b. Epub 2009 May 22.
4
Old substrates for new enzymes of terpenoid biosynthesis.萜类生物合成新酶的旧底物
Proc Natl Acad Sci U S A. 2009 Jun 30;106(26):10402-3. doi: 10.1073/pnas.0905226106. Epub 2009 Jun 24.
5
Crystal structure of (+)-delta-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis.来自陆地棉的(+)-δ-杜松烯合酶的晶体结构及催化作用中金属结合基序的进化分歧
Biochemistry. 2009 Jul 7;48(26):6175-83. doi: 10.1021/bi900483b.
6
Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus.担子菌灰盖鬼伞中倍半萜合酶的多样性。
Mol Microbiol. 2009 Jun;72(5):1181-95. doi: 10.1111/j.1365-2958.2009.06717.x. Epub 2009 Apr 28.
7
T-muurolol sesquiterpenes from the marine Streptomyces sp. M491 and revision of the configuration of previously reported amorphanes.来自海洋链霉菌属菌株M491的T-穆罗洛尔倍半萜以及对先前报道的无定形烷构型的修订
J Nat Prod. 2009 Jan;72(1):99-101. doi: 10.1021/np8006843.
8
MODBASE, a database of annotated comparative protein structure models and associated resources.MODBASE,一个带注释的比较蛋白质结构模型及相关资源的数据库。
Nucleic Acids Res. 2009 Jan;37(Database issue):D347-54. doi: 10.1093/nar/gkn791. Epub 2008 Oct 23.
9
Efficient synthesis of functional isoprenoids from acetoacetate through metabolic pathway-engineered Escherichia coli.通过代谢途径工程改造的大肠杆菌从乙酰乙酸高效合成功能性类异戊二烯。
Appl Microbiol Biotechnol. 2009 Jan;81(5):915-25. doi: 10.1007/s00253-008-1724-7. Epub 2008 Oct 3.
10
Volatiles released by a Streptomyces species isolated from the North Sea.从北海分离出的一种链霉菌释放的挥发性物质。
Chem Biodivers. 2005 Jul;2(7):837-65. doi: 10.1002/cbdv.200590062.