Suppr超能文献

一种用于处理高角度分辨率扩散图像的非参数黎曼框架及其在基于 ODF 的形态测量学中的应用。

A nonparametric Riemannian framework for processing high angular resolution diffusion images and its applications to ODF-based morphometry.

机构信息

Department of Mathematics, National University of Singapore, Singapore.

出版信息

Neuroimage. 2011 Jun 1;56(3):1181-201. doi: 10.1016/j.neuroimage.2011.01.053. Epub 2011 Feb 1.

Abstract

High angular resolution diffusion imaging (HARDI) has become an important technique for imaging complex oriented structures in the brain and other anatomical tissues. This has motivated the recent development of several methods for computing the orientation probability density function (PDF) at each voxel. However, much less work has been done on developing techniques for filtering, interpolation, averaging and principal geodesic analysis of orientation PDF fields. In this paper, we present a Riemannian framework for performing such operations. The proposed framework does not require that the orientation PDFs be represented by any fixed parameterization, such as a mixture of von Mises-Fisher distributions or a spherical harmonic expansion. Instead, we use a nonparametric representation of the orientation PDF. We exploit the fact that under the square-root re-parameterization, the space of orientation PDFs forms a Riemannian manifold: the positive orthant of the unit Hilbert sphere. We show that various orientation PDF processing operations, such as filtering, interpolation, averaging and principal geodesic analysis, may be posed as optimization problems on the Hilbert sphere, and can be solved using Riemannian gradient descent. We illustrate these concepts with numerous experiments on synthetic, phantom and real datasets. We show their application to studying left/right brain asymmetries.

摘要

高角度分辨率扩散成像(HARDI)已成为在大脑和其他解剖组织中成像复杂定向结构的重要技术。这促使人们最近开发了几种在每个体素上计算方向概率密度函数(PDF)的方法。然而,在开发方向 PDF 场的滤波、插值、平均和主测地线分析技术方面的工作要少得多。在本文中,我们提出了一个用于执行此类操作的黎曼框架。所提出的框架不需要将方向 PDF 表示为任何固定参数化,例如 von Mises-Fisher 分布的混合或球谐展开。相反,我们使用方向 PDF 的非参数表示。我们利用了这样一个事实,即在平方根重新参数化下,方向 PDF 的空间形成了一个黎曼流形:单位希尔伯特球的正半轴。我们表明,各种方向 PDF 处理操作,如滤波、插值、平均和主测地线分析,可以作为希尔伯特球上的优化问题来提出,并可以使用黎曼梯度下降来解决。我们使用合成、幻影和真实数据集上的大量实验来说明这些概念。我们展示了它们在研究左右脑不对称性中的应用。

相似文献

2
A Riemannian framework for orientation distribution function computing.一种用于方向分布函数计算的黎曼框架。
Med Image Comput Comput Assist Interv. 2009;12(Pt 1):911-8. doi: 10.1007/978-3-642-04268-3_112.
8
Directional functions for orientation distribution estimation.用于取向分布估计的定向函数。
Med Image Anal. 2009 Jun;13(3):432-44. doi: 10.1016/j.media.2009.01.004. Epub 2009 Feb 5.

引用本文的文献

2
Flow-based Geometric Interpolation of Fiber Orientation Distribution Functions.基于流的纤维取向分布函数几何插值
Med Image Comput Comput Assist Interv. 2023 Oct;14227:46-55. doi: 10.1007/978-3-031-43993-3_5. Epub 2023 Oct 1.
5
Riemannian Nonlinear Mixed Effects Models: Analyzing Longitudinal Deformations in Neuroimaging.黎曼非线性混合效应模型:分析神经影像学中的纵向变形
Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2017 Jul;2017:5777-5786. doi: 10.1109/CVPR.2017.612. Epub 2017 Nov 9.
6
Advances in computational and statistical diffusion MRI.计算和统计弥散磁共振成像的进展。
NMR Biomed. 2019 Apr;32(4):e3805. doi: 10.1002/nbm.3805. Epub 2017 Nov 14.
7
SR-HARDI: Spatially Regularizing High Angular Resolution Diffusion Imaging.SR-HARDI:空间正则化高角分辨率扩散成像
J Comput Graph Stat. 2016;25(4):1195-1211. doi: 10.1080/10618600.2015.1105750. Epub 2015 Nov 11.
8
Manifold-valued Dirichlet Processes.流形值狄利克雷过程
JMLR Workshop Conf Proc. 2015 Jul;2015:1199-1208.
9

本文引用的文献

1
A Novel Representation for Riemannian Analysis of Elastic Curves in ℝ.实数空间中弹性曲线的黎曼分析的一种新表示法。
Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2007 Jul 16;2007(17-22 June 2007):1-7. doi: 10.1109/CVPR.2007.383185.
4
A Riemannian framework for orientation distribution function computing.一种用于方向分布函数计算的黎曼框架。
Med Image Comput Comput Assist Interv. 2009;12(Pt 1):911-8. doi: 10.1007/978-3-642-04268-3_112.
6
Clustering Fiber Traces Using Normalized Cuts.使用归一化割算法对纤维轨迹进行聚类
Med Image Comput Comput Assist Interv. 2004 Sep 2;3216/2004(3216):368-375. doi: 10.1007/b100265.
7
The effect of metric selection on the analysis of diffusion tensor MRI data.度量选择对弥散张量 MRI 数据分析的影响。
Neuroimage. 2010 Feb 1;49(3):2190-204. doi: 10.1016/j.neuroimage.2009.10.071. Epub 2009 Oct 30.
10
Directional functions for orientation distribution estimation.用于取向分布估计的定向函数。
Med Image Anal. 2009 Jun;13(3):432-44. doi: 10.1016/j.media.2009.01.004. Epub 2009 Feb 5.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验