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海洋放线菌属新种,一种新型深海放线菌,从海洋沉积物中分离得到,可产生深渊霉素。

Verrucosispora maris sp. nov., a novel deep-sea actinomycete isolated from a marine sediment which produces abyssomicins.

机构信息

School of Biology, University of Newcastle, Newcastle upon Tyne, UK.

出版信息

Antonie Van Leeuwenhoek. 2012 Jan;101(1):185-93. doi: 10.1007/s10482-011-9651-5. Epub 2011 Oct 12.

Abstract

Verrucosispora isolate AB-18-032(T), the abyssomicin- and proximicin-producing actinomycete, has chemotaxonomic and morphological properties consistent with its classification in the genus Verrucosispora. The organism formed a distinct phyletic line in the Verrucosispora 16S rRNA gene tree sharing similarities of 99.7%, 98.7% and 98.9% with Verrucosispora gifhornensis DSM 44337(T), Verrucosispora lutea YIM 013(T) and Verrucosispora sediminis MS 426(T), respectively. It was readily distinguished from the two latter species using a range of phenotypic features and from V. gifhornensis DSM 44337(T), its nearest phylogenetic neighbor, by a DNA G+C content of 65.5 mol% obtained by thermal denaturation and fluorometry and DNA:DNA relatedness values of 64.0% and 65.0% using renaturation and fluorometric methods, respectively. It is apparent from the combined genotypic and phenotypic data that strain AB-18-032(T) should be classified in the genus Verrucosispora as a new species. The name Verrucosispora maris sp. nov. is proposed for this taxon with isolate AB-18-032(T) (= DSM 45365(T) = NRRL B-24793(T)) as the type strain.

摘要

深渊霉素和普罗米辛产生放线菌 AB-18-032(T) 是一株游动放线菌,具有化学分类学和形态学特征,与 Verrucosispora 属的分类一致。该生物在 Verrucosispora 16S rRNA 基因树中形成了一个独特的分支,与 Verrucosispora gifhornensis DSM 44337(T)、Verrucosispora lutea YIM 013(T) 和 Verrucosispora sediminis MS 426(T) 的相似度分别为 99.7%、98.7%和 98.9%。它与后两种生物在一系列表型特征上很容易区分,与最近的亲缘关系种 V. gifhornensis DSM 44337(T) 在 DNA G+C 含量(通过热变性和荧光法测定为 65.5 mol%)和 DNA:DNA 同源性(分别使用复性和荧光法测定为 64.0%和 65.0%)方面也有明显区别。综合基因型和表型数据表明,AB-18-032(T) 菌株应被归类为 Verrucosispora 属的一个新种。该分类单元命名为 Verrucosispora maris sp. nov.,其模式菌株为 AB-18-032(T)(=DSM 45365(T)=NRRL B-24793(T))。

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