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文昌软疣孢菌,新种,从红树林土壤中分离得到。

Verrucosispora wenchangensis sp. nov., isolated from mangrove soil.

机构信息

Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, People's Republic of China.

出版信息

Antonie Van Leeuwenhoek. 2012 Jun;102(1):1-7. doi: 10.1007/s10482-012-9707-1. Epub 2012 Feb 14.

Abstract

An actinomycete strain 234402(T) was isolated from a mangrove soil sample collected in Wenchang, China. Phylogenetic analysis of the 16S rRNA gene sequence of strain 234402(T) indicated that the highest similarity was to Verrucosispora sediminis MS426(T) (99.25%). The cell wall contained meso-diaminopimelic acid. The major menaquinones were MK-9(H(4)) and MK-9(H(6)), with MK-9(H(8)) as minor components. The characteristic whole-cell sugars were xylose, mannose and glucose. The phospholipid profile was found to comprise phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylinositol mannoside and an unknown phospholipid. The DNA G+C content was 69.2 mol%. The results of physiological and biochemical tests and low DNA-DNA relatedness demonstrated strain 234402(T) could be readily distinguished from the closely related Verrucosispora species. On the basis of these phenotypic and genotypic data, strain 234402(T) represents a novel species of the genus Verrucosispora, for which the name Verrucosispora wenchangensis sp. nov. is proposed. The type strain is 234402(T) (=CCTCC AA 2011018(T)=DSM 45674(T)).

摘要

一株放线菌 234402(T) 从中国文昌的红树林土壤样本中分离得到。234402(T) 菌株的 16S rRNA 基因序列的系统发育分析表明,其与 Verrucosispora sediminis MS426(T) 的相似性最高(99.25%)。细胞壁含有 meso-二氨基庚二酸。主要的menaquinones 为 MK-9(H(4)) 和 MK-9(H(6)),MK-9(H(8)) 为次要成分。特征性的全细胞糖为木糖、甘露糖和葡萄糖。磷脂谱包含磷脂酰乙醇胺、双磷脂酰甘油、磷脂酰肌醇甘露糖苷和一种未知的磷脂。DNA G+C 含量为 69.2 mol%。生理生化试验和低 DNA-DNA 同源性的结果表明,234402(T) 菌株很容易与亲缘关系密切的 Verrucosispora 种区分开来。基于这些表型和基因型数据,234402(T) 菌株代表了 Verrucosispora 属的一个新种,命名为 Verrucosispora wenchangensis sp. nov.。模式菌株为 234402(T)(=CCTCC AA 2011018(T)=DSM 45674(T))。

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