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安德曼疣孢菌,一种新的海洋海绵内生真菌,从海洋海绵中分离得到。

Verrucosispora andamanensis sp. nov., isolated from a marine sponge.

机构信息

Department of Biology, Faculty of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok 10520, Thailand.

Biotec Culture Collection (BCC), BIOTEC Central Research Unit, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, 113 Thailand Science Park, Phaholyothin Road, Klong 1, Klong Luang, Pathumthani 12120, Thailand.

出版信息

Int J Syst Evol Microbiol. 2013 Nov;63(Pt 11):3970-3974. doi: 10.1099/ijs.0.050906-0. Epub 2013 May 24.

Abstract

An actinomycete strain, SP03-05(T), was isolated from a marine sponge sample (Xestospongia sp.) collected from Phuket Province of Thailand. The strain was aerobic, Gram-stain-positive and produced single spores at the tips of the substrate mycelium. Strain SP03-05(T) contained meso-diaminopimelic acid in the peptidoglycan; whole-cell sugars were arabinose, galactose, glucose, rhamnose, ribose and xylose. The polar lipid profile of strain SP03-05(T) consisted of phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannosides and unknown polar lipids. Morphological and chemotaxonomic characteristics of the strain identified it as a member of the family Micromonosporaceae. Phylogenetic analysis based on 16S rRNA gene sequences showed similarity of the strain to Verrucosispora lutea YIM 013(T) (96.90 %), Verrucosispora sediminis MS426(T) (96.90 %), Verrucosispora gifhornensis DSM 44337(T) (96.80 %), Verrucosispora maris AB-18-032(T) (96.80 %) and Verrucosispora qiuiae RtIII47(T) (95.40 %). The DNA G+C content was 72.4 mol%. The phenotypic, genotypic and DNA-DNA hybridization results supported the classification of this strain as a representative of a novel species in the genus Verrucosispora, for which the name Verrucosispora andamanensis sp. nov. is proposed. The type strain is SP03-05(T) ( = BCC 45620(T) = NBRC 109075(T)).

摘要

一株放线菌菌株 SP03-05(T) 从泰国普吉省采集的海绵样品(Xestospongia sp.)中分离得到。该菌株为需氧、革兰氏阳性,在基质菌丝的顶端产生单个孢子。菌株 SP03-05(T) 的肽聚糖中含有 meso-二氨基庚二酸;全细胞糖为阿拉伯糖、半乳糖、葡萄糖、鼠李糖、核糖和木糖。菌株 SP03-05(T) 的极性脂谱由磷脂酰乙醇胺、双磷脂酰甘油、磷脂酰肌醇、磷脂酰肌醇甘露糖苷和未知极性脂组成。根据 16S rRNA 基因序列进行的形态和化学分类分析表明,该菌株是 Micromonosporaceae 家族的成员。基于 16S rRNA 基因序列的系统发育分析表明,该菌株与 Verrucosispora lutea YIM 013(T)(96.90%)、Verrucosispora sediminis MS426(T)(96.90%)、Verrucosispora gifhornensis DSM 44337(T)(96.80%)、Verrucosispora maris AB-18-032(T)(96.80%)和 Verrucosispora qiuiae RtIII47(T)(95.40%)最为相似。DNA G+C 含量为 72.4 mol%。表型、基因型和 DNA-DNA 杂交结果支持将该菌株分类为 Verrucosispora 属的一个新种,命名为 Verrucosispora andamanensis sp. nov.。模式菌株为 SP03-05(T)( = BCC 45620(T) = NBRC 109075(T))。

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