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鸡基因组DNA中与肿瘤病毒相关序列的结构研究:EcoRI和Bgl I限制性酶切的两步分析以及一种普遍存在的内源性前病毒的初步定位

Structural studies on oncornavirus-related sequences in chicken genomic DNA: two-step analyses of EcoRI and Bgl I restriction digests and tentative mapping of a ubiquitous endogenous provirus digests and tentative mapping of a ubiquitous endogenous provirus.

作者信息

McClements W, Hanafusa H, Tilghman S, Skalka A

出版信息

Proc Natl Acad Sci U S A. 1979 May;76(5):2165-9. doi: 10.1073/pnas.76.5.2165.

DOI:10.1073/pnas.76.5.2165
PMID:221917
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC383558/
Abstract

DNA from a variety of uninfected chicken cell types has been analyzed by using restriction endonuclease digestion and RPC-5 ion-exchange chromatography followed by agarose gel electrophoresis. Endogenous retrovirus sequences were detected by using a 32P-labeled avian leukosis viral RNA probe. One simple pattern was identified in an individual containing unexpressed endogenous proviral genes (gs-chf-phenotype for group-specific antigens and chicken helper factor) that was common to all individuals studied. A tentative restriction has been derived for this and one other gs-chf-endogenous provirus. Other gs-chf-individuals and individuals with other phenotypes (e.g., gs+ chf+ and gsl chlfhE) showed more complicated patterns that often included additional bands and thus probably additional proviruses. RNA from an avian sarcoma virus was used to detect cellular sequences (sarc) homologous to the viral transforming gene (src). Results have revealed that a single restriction endonuclease EcoRI fragment of 13 x 10(6) daltons contains the majority of these sequences and confirm that they are not adjacent to the endogenous provirus.

摘要

利用限制性内切酶消化、RPC - 5离子交换色谱法,随后进行琼脂糖凝胶电泳,对来自多种未感染鸡细胞类型的DNA进行了分析。使用32P标记的禽白血病病毒RNA探针检测内源性逆转录病毒序列。在一个含有未表达内源性前病毒基因(群特异性抗原和鸡辅助因子的gs - chf - 表型)的个体中鉴定出一种简单模式,该模式在所有研究个体中都很常见。已初步确定了这种和另一种gs - chf - 内源性前病毒的限制性图谱。其他gs - chf个体和具有其他表型(例如,gs + chf + 和gsl chlfhE)的个体显示出更复杂的模式,通常包括额外的条带,因此可能含有额外的前病毒。使用禽肉瘤病毒的RNA来检测与病毒转化基因(src)同源的细胞序列(sarc)。结果表明,一个13×10(6)道尔顿的单一限制性内切酶EcoRI片段包含了这些序列的大部分,并证实它们不与内源性前病毒相邻。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/50cb1972662e/pnas00005-0086-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/99d02485253a/pnas00005-0084-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/5421467a92b9/pnas00005-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/35eea222a03c/pnas00005-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/50cb1972662e/pnas00005-0086-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/99d02485253a/pnas00005-0084-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/5421467a92b9/pnas00005-0085-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/35eea222a03c/pnas00005-0086-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf04/383558/50cb1972662e/pnas00005-0086-b.jpg

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Structural studies on oncornavirus-related sequences in chicken genomic DNA: two-step analyses of EcoRI and Bgl I restriction digests and tentative mapping of a ubiquitous endogenous provirus digests and tentative mapping of a ubiquitous endogenous provirus.鸡基因组DNA中与肿瘤病毒相关序列的结构研究:EcoRI和Bgl I限制性酶切的两步分析以及一种普遍存在的内源性前病毒的初步定位
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引用本文的文献

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Identification of transcriptional elements within the long terminal repeat of Rous sarcoma virus.劳氏肉瘤病毒长末端重复序列中转录元件的鉴定。

本文引用的文献

1
An avian leukosis virus related to RSV(O): properties and evidence for helper activity.一种与劳斯肉瘤病毒(O型)相关的禽白血病病毒:特性及辅助活性证据
Virology. 1971 Jan;43(1):223-34. doi: 10.1016/0042-6822(71)90240-6.
2
Reliability of the RNA-DNA filter hybridization for the detection of oncornavirus-specific DNA sequences.用于检测肿瘤病毒特异性DNA序列的RNA-DNA滤膜杂交法的可靠性。
J Virol. 1974 Aug;14(2):225-30. doi: 10.1128/JVI.14.2.225-230.1974.
3
Genetic control of expression of endogenous virus genes in chicken cells.鸡细胞内源性病毒基因表达的遗传控制。
Mol Cell Biol. 1983 Oct;3(10):1834-45. doi: 10.1128/mcb.3.10.1834-1845.1983.
4
Nucleotide sequence of the long terminal repeat and flanking cellular sequences of avian endogenous retrovirus ev-2: variation in Rous-associated virus-0 expression cannot be explained by differences in primary sequence.禽内源性逆转录病毒ev-2长末端重复序列及侧翼细胞序列的核苷酸序列:劳斯相关病毒-0表达的差异无法用一级序列的差异来解释。
J Virol. 1983 Feb;45(2):868-71. doi: 10.1128/JVI.45.2.868-871.1983.
5
Comparison between the viral transforming gene (src) of recovered avian sarcoma virus and its cellular homolog.恢复性禽肉瘤病毒的病毒转化基因(src)与其细胞同源基因的比较。
Mol Cell Biol. 1981 Nov;1(11):1024-37. doi: 10.1128/mcb.1.11.1024-1037.1981.
6
Restriction endonuclease mapping of the proviral DNA of the exogenous RIII murine mammary tumor virus.外源性RIII小鼠乳腺肿瘤病毒前病毒DNA的限制性内切酶图谱分析
J Virol. 1982 Mar;41(3):855-67. doi: 10.1128/JVI.41.3.855-867.1982.
7
Biological activity of cloned retroviral DNA in microinjected cells.显微注射细胞中克隆逆转录病毒DNA的生物活性。
Proc Natl Acad Sci U S A. 1981 Jul;78(7):4383-7. doi: 10.1073/pnas.78.7.4383.
8
Viral DNA synthesized in vitro by avian retrovirus particles permeabilized with melittin. II. Evidence for a strand displacement mechanism in plus-strand synthesis.用蜂毒肽通透化的禽逆转录病毒颗粒在体外合成的病毒DNA。II. 正链合成中链置换机制的证据。
J Virol. 1981 Jan;37(1):117-26. doi: 10.1128/JVI.37.1.117-126.1981.
9
Viral DNA synthesized in vitro by avian retrovirus particles permeabilized with melittin. I. Kinetics of synthesis and size of minus- and plus-strand transcripts.蜂毒肽通透处理的禽逆转录病毒颗粒在体外合成的病毒DNA。I. 负链和正链转录本的合成动力学及大小
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Identification of the avian myeloblastosis virus genome. II. Restriction endonuclease analysis of DNA from lambda proviral recombinants and leukemic myeoblast clones.禽成髓细胞瘤病毒基因组的鉴定。II. λ 原病毒重组体和白血病成髓细胞克隆的 DNA 的限制性内切酶分析。
J Virol. 1980 Nov;36(2):325-36. doi: 10.1128/JVI.36.2.325-336.1980.
Virology. 1974 Apr;58(2):439-48. doi: 10.1016/0042-6822(74)90078-6.
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Measurement of endogenous leukosis virus nucleotide sequences in the DNA of normal avian embryos by RNA-DNA hybridization.通过RNA-DNA杂交技术检测正常禽胚DNA中内源性白血病病毒核苷酸序列
Virology. 1973 May;53(1):196-203. doi: 10.1016/0042-6822(73)90478-9.
5
Genetic recombination with avian tumor virus.与禽肿瘤病毒的基因重组。
Virology. 1972 Jul;49(1):37-44. doi: 10.1016/s0042-6822(72)80005-9.
6
Widespread presence, in chickens, of DNA complementary to the RNA genome of avian leukosis viruses.鸡体内广泛存在与禽白血病病毒RNA基因组互补的DNA。
Proc Natl Acad Sci U S A. 1972 Mar;69(3):576-80. doi: 10.1073/pnas.69.3.576.
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Existence and expression of tumor virus genes in chick embryo cells.肿瘤病毒基因在鸡胚细胞中的存在与表达。
Virology. 1972 Feb;47(2):475-82. doi: 10.1016/0042-6822(72)90283-8.
8
Detection of avian tumor virus-specific nucleotide sequences in avian cell DNAs (reassociation kinetics-RNA tumor viruses-gas antigen-Rous sarcoma virus, chick cells).在禽细胞DNA中检测禽肿瘤病毒特异性核苷酸序列(重缔合动力学- RNA肿瘤病毒-气体抗原-劳氏肉瘤病毒,鸡细胞)
Proc Natl Acad Sci U S A. 1972 Jan;69(1):20-4. doi: 10.1073/pnas.69.1.20.
9
Induction of avian tumor viruses in normal cells by physical and chemical carcinogens.物理和化学致癌物在正常细胞中诱导禽肿瘤病毒
Virology. 1971 Dec;46(3):920-38. doi: 10.1016/0042-6822(71)90091-2.
10
DNA in uninfected and virus-infected cells complementary to avian tumor virus RNA.未感染和病毒感染细胞中与禽肿瘤病毒RNA互补的DNA。
Proc Natl Acad Sci U S A. 1971 Oct;68(10):2336-40. doi: 10.1073/pnas.68.10.2336.