Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad - 500 007, India.
Int J Syst Evol Microbiol. 2013 Feb;63(Pt 2):729-734. doi: 10.1099/ijs.0.040907-0. Epub 2012 May 4.
A novel gram-negative, rod-shaped, non-motile, psychrophilic bacterium, designated strain E4-9a(T), was isolated from a marine sediment sample collected at a depth of 276 m from Kongsfjorden, Svalbard, in the Arctic Ocean. The colony colour was golden yellow. Strain E4-9a(T) was positive for amylase activity at 5 °C. The predominant fatty acids were iso-C(15 : 1) G (21.8 %), anteiso-C(15 : 0) (19.1 %), anteiso-C(15 : 1) A (18.6 %), iso-C(15 : 0) (13.8 %) and iso-C(16 : 1) H (6.4 %). Strain E4-9a(T) contained MK-6 as the major respiratory quinone. The polar lipids consisted of phosphatidylethanolamine, three unidentified aminolipids (AL1, AL4 and AL5), an unidentified phospholipid and four unidentified lipids (L1, L4 to L6). Based on 16S rRNA gene sequence similarity, it was ascertained that the closest related species to E4-9a(T) were Lacinutrix copepodicola, L. algicola and L. mariniflava, with sequence similarity to the respective type strains of 98.5, 96.5 and 95.8 %. Phylogenetic analysis showed that strain E4-9a(T) clustered with the type strain of L. copepodicola and with those of L. algicola and L. mariniflava at distances of 1.5 and 4.8 % (98.5 and 95.2 % similarity), respectively. However, DNA-DNA hybridization with L. copepodicola DJ3(T) showed 59 % relatedness with respect to strain E4-9a(T). The DNA G+C content of strain E4-9a(T) was 29 mol%. Based on the results of DNA-DNA hybridization and phenotypic data, it appears that strain E4-9a(T) represents a novel species of the genus Lacinutrix, for which the name Lacinutrix himadriensis sp. nov. is proposed. The type strain is E4-9a(T) ( = CIP 110310(T) = KCTC 23612(T)).
一株新的革兰氏阴性、杆状、非运动、嗜冷细菌,被命名为 E4-9a(T) 菌株,从北冰洋 Kongsfjorden 的深海沉积物样本中分离得到,深度为 276 米。菌落颜色为金黄色。E4-9a(T) 菌株在 5°C 时淀粉酶活性呈阳性。优势脂肪酸为 iso-C(15 : 1) G (21.8 %)、anteiso-C(15 : 0) (19.1 %)、anteiso-C(15 : 1) A (18.6 %)、iso-C(15 : 0) (13.8 %) 和 iso-C(16 : 1) H (6.4 %)。E4-9a(T) 菌株含有 MK-6 作为主要呼吸醌。极性脂由磷脂酰乙醇胺、三种未鉴定的胺脂 (AL1、AL4 和 AL5)、一种未鉴定的磷脂和四种未鉴定的脂 (L1、L4 到 L6) 组成。基于 16S rRNA 基因序列相似性,与 E4-9a(T) 最接近的相关种是 Lacinutrix copepodicola、L. algicola 和 L. mariniflava,与各自的模式株的序列相似性分别为 98.5%、96.5%和 95.8%。系统发育分析表明,菌株 E4-9a(T)与 L. copepodicola 的模式株以及 L. algicola 和 L. mariniflava 的模式株聚在一起,距离分别为 1.5% 和 4.8%(98.5%和 95.2%的相似度)。然而,与 L. copepodicola DJ3(T) 的 DNA-DNA 杂交显示与菌株 E4-9a(T) 的相关性为 59%。E4-9a(T) 菌株的 DNA G+C 含量为 29 mol%。基于 DNA-DNA 杂交和表型数据的结果,E4-9a(T) 菌株似乎代表了 Lacinutrix 属的一个新种,因此建议将其命名为 Lacinutrix himadriensis sp. nov.。模式菌株为 E4-9a(T)(=CIP 110310(T)=KCTC 23612(T))。