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本文引用的文献

1
Breadth by depth: expanding our understanding of the repair of transposon-induced DNA double strand breaks via deep-sequencing.广度与深度:通过深度测序拓展我们对转座子诱导的 DNA 双链断裂修复的理解。
DNA Repair (Amst). 2011 Oct 10;10(10):1023-33. doi: 10.1016/j.dnarep.2011.07.011. Epub 2011 Sep 1.
2
Maize Ac/Ds transposon system leads to highly efficient germline transmission of transgenes in medaka (Oryzias latipes).玉米 Ac/Ds 转座子系统可使转基因在青鳉(Oryzias latipes)中高效地经生殖细胞传递。
Biochimie. 2011 Oct;93(10):1858-64. doi: 10.1016/j.biochi.2011.07.006. Epub 2011 Jul 18.
3
Effective generation of transgenic reporter and gene trap lines of the medaka (Oryzias latipes) using the Ac/Ds transposon system.利用 Ac/Ds 转座子系统高效生成转基因报告基因和基因捕获斑马鱼(Oryzias latipes)品系。
Transgenic Res. 2012 Feb;21(1):149-62. doi: 10.1007/s11248-011-9514-x. Epub 2011 Apr 30.
4
The catalytic domain of all eukaryotic cut-and-paste transposase superfamilies.所有真核剪切粘贴转座酶超家族的催化结构域。
Proc Natl Acad Sci U S A. 2011 May 10;108(19):7884-9. doi: 10.1073/pnas.1104208108. Epub 2011 Apr 25.
5
A hyperactive piggyBac transposase for mammalian applications.一种用于哺乳动物应用的活性过高的猪 bac 转座酶。
Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1531-6. doi: 10.1073/pnas.1008322108. Epub 2011 Jan 4.
6
DNA transposon Hermes inserts into DNA in nucleosome-free regions in vivo.Hermes 转座子在体内的无核小体 DNA 区域插入 DNA。
Proc Natl Acad Sci U S A. 2010 Dec 21;107(51):21966-72. doi: 10.1073/pnas.1016382107. Epub 2010 Dec 3.
7
Expression, localisation and phylogeny of a novel family of plant-specific membrane proteins.新型植物特异性膜蛋白家族的表达、定位和系统发生分析。
Plant Biol (Stuttg). 2010 Sep;12 Suppl 1:140-52. doi: 10.1111/j.1438-8677.2010.00381.x.
8
Genome-wide distribution of transposed Dissociation elements in maize.玉米中转座解离元件的全基因组分布。
Plant Cell. 2010 Jun;22(6):1667-85. doi: 10.1105/tpc.109.073452. Epub 2010 Jun 25.
9
A high-throughput splinkerette-PCR method for the isolation and sequencing of retroviral insertion sites.一种用于分离和测序逆转录病毒插入位点的高通量连接子介导PCR方法。
Nat Protoc. 2009;4(5):789-98. doi: 10.1038/nprot.2009.64. Epub 2009 Apr 30.
10
Molecular evolution of a novel hyperactive Sleeping Beauty transposase enables robust stable gene transfer in vertebrates.新型超活性 Sleeping Beauty 转座酶的分子进化使脊椎动物中强大稳定的基因转移成为可能。
Nat Genet. 2009 Jun;41(6):753-61. doi: 10.1038/ng.343. Epub 2009 May 3.

玉米转座子激活因子(Ac)的一种活性转座酶。

A hyperactive transposase of the maize transposable element activator (Ac).

机构信息

Dahlem Centre of Plant Sciences, Freie Universität Berlin, 14195 Berlin, Germany.

出版信息

Genetics. 2012 Jul;191(3):747-56. doi: 10.1534/genetics.112.139642. Epub 2012 May 4.

DOI:10.1534/genetics.112.139642
PMID:22562933
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3389971/
Abstract

Activator/Dissociation (Ac/Ds) transposable elements from maize are widely used as insertional mutagenesis and gene isolation tools in plants and more recently also in medaka and zebrafish. They are particularly valuable for plant species that are transformation-recalcitrant and have long generation cycles or large genomes with low gene densities. Ac/Ds transposition frequencies vary widely, however, and in some species they are too low for large-scale mutagenesis. We discovered a hyperactive Ac transposase derivative, AcTPase(4x), that catalyzes in the yeast Saccharomyces cerevisiae 100-fold more frequent Ds excisions than the wild-type transposase, whereas the reintegration frequency of excised Ds elements is unchanged (57%). Comparable to the wild-type transposase in plants, AcTPase(4x) catalyzes Ds insertion preferentially into coding regions and to genetically linked sites, but the mutant protein apparently has lost the weak bias of the wild-type protein for insertion sites with elevated guanine-cytosine content and nonrandom protein-DNA twist. AcTPase(4x) exhibits hyperactivity also in Arabidopsis thaliana where it effects a more than sixfold increase in Ds excision relative to wild-type AcTPase and thus may be useful to facilitate Ac/Ds-based insertion mutagenesis approaches.

摘要

从玉米中分离出的激活/解离(Ac/Ds)转座元件被广泛用作植物中的插入诱变和基因分离工具,最近也被用于斑马鱼和日本青鳉。对于转化抗性强、世代周期长或基因组大、基因密度低的植物物种来说,它们尤其有价值。然而,Ac/Ds 转座频率差异很大,在某些物种中,其频率太低,无法进行大规模诱变。我们发现了一种超活性 Ac 转座酶衍生物 AcTPase(4x),它在酵母酿酒酵母中催化 Ds 切除的频率比野生型转座酶高 100 倍,而切除的 Ds 元件的重新整合频率保持不变(57%)。与植物中的野生型转座酶类似,AcTPase(4x) 优先催化 Ds 插入到编码区和遗传连锁的位点,但突变蛋白显然失去了野生型蛋白对富含鸟嘌呤-胞嘧啶的插入位点和非随机蛋白-DNA 扭转的弱偏向性。AcTPase(4x) 在拟南芥中也表现出超活性,与野生型 AcTPase 相比,它使 Ds 切除增加了六倍以上,因此可能有助于促进 Ac/Ds 基于插入诱变的方法。