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来自星虫(裸体方格星虫)微卫星DNA位点的分离与鉴定

Isolation and characterization of microsatellite DNA loci from the peanut worm, Sipunculus nudus.

作者信息

Wang Q H, Guo Y S, Wang Z D, Du X D, Deng Y W

机构信息

Fisheries College, Guangdong Ocean University, Zhanjiang, China.

出版信息

Genet Mol Res. 2012 Jun 15;11(2):1662-5. doi: 10.4238/2012.June.15.15.

Abstract

Sipunculus nudus, the peanut worm, is the best known species in its genus. This unsegmented subtidal marine worm is consumed in some parts of Asia and is also used as fish bait. We found 20 microsatellite DNA markers for S. nudus. The number of alleles per polymorphic locus ranged from two to seven in a sample of 39 individuals. Observed and expected heterozygosities per polymorphic locus varied from 0.103 to 1.000 and from 0.307 to 0.771, respectively. Five loci showed significant departure from Hardy-Weinberg equilibrium after sequential Bonferroni's correction. No significant linkage disequilibrium between pairs of loci was found. These microsatellite markers will provide useful tools for investigating genetic population structure, population history and conservation management of S. nudus.

摘要

方格星虫,即海肠子,是其所属类属中最为人熟知的物种。这种不分节的潮下带海洋蠕虫在亚洲的一些地区被食用,也被用作鱼饵。我们为方格星虫找到了20个微卫星DNA标记。在一个39个个体的样本中,每个多态性位点的等位基因数量从2个到7个不等。每个多态性位点的观察杂合度和预期杂合度分别在0.103至1.000和0.307至0.771之间变化。经过连续的邦费罗尼校正后,有5个位点显著偏离哈迪-温伯格平衡。未发现位点对之间存在显著的连锁不平衡。这些微卫星标记将为研究方格星虫的遗传种群结构、种群历史和保护管理提供有用的工具。

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