Liaoning Provincial Key Laboratory of Carbohydrates, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China.
Curr Microbiol. 2013 May;66(5):487-92. doi: 10.1007/s00284-013-0305-x. Epub 2013 Jan 13.
A Gram-negative, aerobic, rod-shaped, motile, non-spore-forming bacterial strain, designated 13-Q(T), was isolated from seaside soil under the stacks of the red algae in Hainan province in China. Identification was carried out on the basis of polyphasic taxonomy. Phylogenetic analysis of 16S rRNA gene sequences showed that strain 13-Q(T) belonged to the genus Pedobacter, and the highest similarity was 94.4 % with Pedobacter terricola KCTC 12876(T). Strain 13-Q(T) was able to grow at 10-40 °C, in pH 5.0-10.0, in the presence of 0-2.0 % NaCl. The major fatty acids were iso-C(15:0) (40.4 %), summed feature 3 (comprising iso-C(15:0) 2-OH and/or C(16:1) ω7c) (18.9 %) and iso-C(17:0) 3-OH (18.4 %). The predominant menaquinone was MK-7. The G+C content of the genomic DNA was 42.7 mol%. Strain 13-Q(T) could be distinguished from the nearest phylogenetic neighbors by various chemotaxonomic and phenotypic properties. The results of the polyphasic analyses suggested that strain 13-Q(T) should be considered to represent a novel species of the genus Pedobacter, for which the name Pedobacter hainanensis sp. nov. is proposed. The type strain is 13-Q(T) (=CCTCC AB 2012076(T) = NRRL B-59850(T)).
一株革兰氏阴性、需氧、杆状、运动、不产芽孢的细菌菌株,命名为 13-Q(T),从中国海南省红藻垛下的海滨土壤中分离得到。鉴定是基于多相分类学进行的。16S rRNA 基因序列的系统发育分析表明,菌株 13-Q(T)属于 Pedobacter 属,与 Pedobacter terricola KCTC 12876(T)的相似度最高为 94.4%。菌株 13-Q(T)能够在 10-40°C、pH 5.0-10.0、0-2.0%NaCl 的条件下生长。主要脂肪酸为 iso-C(15:0)(40.4%)、summed feature 3(包括 iso-C(15:0)2-OH 和/或 C(16:1)ω7c)(18.9%)和 iso-C(17:0)3-OH(18.4%)。主要的menaquinone 是 MK-7。基因组 DNA 的 G+C 含量为 42.7mol%。菌株 13-Q(T)可以通过各种化学分类学和表型特性与最近的系统发育邻居区分开来。多相分析的结果表明,菌株 13-Q(T)应被视为 Pedobacter 属的一个新种,建议命名为 Pedobacter hainanensis sp. nov.。模式菌株为 13-Q(T)=CCTCC AB 2012076(T)=NRRL B-59850(T)。