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Automated segmentation by pixel classification of retinal layers in ophthalmic OCT images.通过眼科光学相干断层扫描(OCT)图像中视网膜层的像素分类进行自动分割。
Biomed Opt Express. 2011 Jun 1;2(6):1743-56. doi: 10.1364/BOE.2.001743. Epub 2011 May 27.
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Retinal Nerve Fiber Layer Segmentation on FD-OCT Scans of Normal Subjects and Glaucoma Patients.正常受试者和青光眼患者频域光学相干断层扫描图像上的视网膜神经纤维层分割
Biomed Opt Express. 2010 Nov 8;1(5):1358-1383. doi: 10.1364/BOE.1.001358.
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Primary retinal pathology in multiple sclerosis as detected by optical coherence tomography.光学相干断层扫描检测多发性硬化症的原发性视网膜病变。
Brain. 2011 Feb;134(Pt 2):518-33. doi: 10.1093/brain/awq346. Epub 2011 Jan 20.
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Segmentation of intra-retinal layers from optical coherence tomography images using an active contour approach.基于主动轮廓方法的光学相干断层扫描图像内视网膜层分割。
IEEE Trans Med Imaging. 2011 Feb;30(2):484-96. doi: 10.1109/TMI.2010.2087390. Epub 2010 Oct 14.
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Automated layer segmentation of macular OCT images using dual-scale gradient information.利用双尺度梯度信息对黄斑OCT图像进行自动层分割。
Opt Express. 2010 Sep 27;18(20):21293-307. doi: 10.1364/OE.18.021293.
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Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation.光谱域光学相干断层扫描(SDOCT)图像中七个视网膜层的自动分割与专家手动分割结果一致。
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Robust segmentation of intraretinal layers in the normal human fovea using a novel statistical model based on texture and shape analysis.使用基于纹理和形状分析的新型统计模型对正常人中央凹内视网膜层进行稳健分割。
Opt Express. 2010 Jul 5;18(14):14730-44. doi: 10.1364/OE.18.014730.
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Automated 3-D intraretinal layer segmentation of macular spectral-domain optical coherence tomography images.黄斑区光谱域光学相干断层扫描图像的视网膜内各层自动三维分割
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Optical Coherence Tomography (OCT) in ophthalmology: introduction.眼科中的光学相干断层扫描(OCT):简介。
Opt Express. 2009 Mar 2;17(5):3978-9. doi: 10.1364/oe.17.003978.

使用随机森林分类器对视网膜光学相干断层扫描(OCT)图像进行分割。

Segmentation of retinal OCT images using a random forest classifier.

作者信息

Lang Andrew, Carass Aaron, Sotirchos Elias, Calabresi Peter, Prince Jerry L

机构信息

Department of Electrical and Computer Engineering, The Johns Hopkins University, Baltimore, MD 21218.

出版信息

Proc SPIE Int Soc Opt Eng. 2013 Mar 13;8669. doi: 10.1117/12.2006649.

DOI:10.1117/12.2006649
PMID:23710325
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3660978/
Abstract

Optical coherence tomography (OCT) has become one of the most common tools for diagnosis of retinal abnormalities. Both retinal morphology and layer thickness can provide important information to aid in the differential diagnosis of these abnormalities. Automatic segmentation methods are essential to providing these thickness measurements since the manual delineation of each layer is cumbersome given the sheer amount of data within each OCT scan. In this work, we propose a new method for retinal layer segmentation using a random forest classifier. A total of seven features are extracted from the OCT data and used to simultaneously classify nine layer boundaries. Taking advantage of the probabilistic nature of random forests, probability maps for each boundary are extracted and used to help refine the classification. We are able to accurately segment eight retinal layers with an average Dice coefficient of 0.79 ± 0.13 and a mean absolute error of 1.21 ± 1.45 pixels for the layer boundaries.

摘要

光学相干断层扫描(OCT)已成为诊断视网膜异常最常用的工具之一。视网膜形态和层厚均可提供重要信息,以辅助这些异常的鉴别诊断。自动分割方法对于提供这些厚度测量至关重要,因为鉴于每次OCT扫描中的数据量巨大,手动描绘每一层都很繁琐。在这项工作中,我们提出了一种使用随机森林分类器进行视网膜层分割的新方法。总共从OCT数据中提取了七个特征,并用于同时对九个层边界进行分类。利用随机森林的概率性质,提取每个边界的概率图并用于帮助优化分类。我们能够准确分割八个视网膜层,层边界的平均骰子系数为0.79±0.13,平均绝对误差为1.21±1.45像素。