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基质辅助激光解吸电离飞行时间质谱分析用于鉴定新描述的气单胞菌属菌种的评估

Evaluation of the MALDI-TOF MS profiling for identification of newly described Aeromonas spp.

作者信息

Vávrová Andrea, Balážová Tereza, Sedláček Ivo, Tvrzová Ludmila, Šedo Ondrej

机构信息

Division of Microbiology, Department of Experimental Biology, Faculty of Science, Masaryk University, Kamenice 735/5, 625 00, Brno, Czech Republic,

出版信息

Folia Microbiol (Praha). 2015 Sep;60(5):375-83. doi: 10.1007/s12223-014-0369-4. Epub 2014 Dec 19.

Abstract

The genus Aeromonas comprises primarily aquatic bacteria and also serious human and animal pathogens with the occurrence in clinical material, drinking water, and food. Aeromonads are typical for their complex taxonomy and nomenclature and for limited possibilities of identification to the species level. According to studies describing the use of MALDI-TOF MS in diagnostics of aeromonads, this modern chemotaxonomical approach reveals quite high percentage of correctly identified isolates. We analyzed 64 Aeromonas reference strains from the set of 27 species. After extending the range of analyzed Aeromonas species by newly described ones, we proved that MALDI-TOF MS procedure accompanied by Biotyper tool is not a reliable diagnostic technique for aeromonads. We obtained quite high percentage of false-positive, incorrect, and uncertain results. The identification of newly described species is accompanied with misidentifications that were observed also in the case of pathogenic aeromonads.

摘要

气单胞菌属主要包括水生细菌,也是临床材料、饮用水和食物中出现的严重的人类和动物病原体。气单胞菌以其复杂的分类学和命名法以及在种水平上有限的鉴定可能性而著称。根据描述基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)在气单胞菌诊断中的应用的研究,这种现代化学分类学方法显示出相当高比例的正确鉴定的分离株。我们分析了来自27个种的64株气单胞菌参考菌株。在用新描述的气单胞菌物种扩展分析范围后,我们证明,伴随Biotyper工具的MALDI-TOF MS程序对于气单胞菌不是一种可靠的诊断技术。我们获得了相当高比例的假阳性、错误和不确定结果。新描述物种的鉴定伴随着错误鉴定,在致病性气单胞菌的情况下也观察到了这种情况。

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