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鸡油菌目内丝核菌真菌的系统发育关系。

Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales.

作者信息

Gónzalez Dolores, Rodriguez-Carres Marianela, Boekhout Teun, Stalpers Joost, Kuramae Eiko E, Nakatani Andreia K, Vilgalys Rytas, Cubeta Marc A

机构信息

Instituto de Ecología, A.C., Red de Biodiversidad y Sistemática, Carretera Antigua a Coatepec No. 351, El Haya, 91070 Xalapa, Veracruz, Mexico.

Department of Plant Pathology, North Carolina State University, Center for Integrated Fungal Research, Campus Box 7251, Raleigh, NC 27695, USA.

出版信息

Fungal Biol. 2016 Apr;120(4):603-619. doi: 10.1016/j.funbio.2016.01.012. Epub 2016 Jan 29.

Abstract

Phylogenetic relationships of Rhizoctonia fungi within the order Cantharellales were studied using sequence data from portions of the ribosomal DNA cluster regions ITS-LSU, rpb2, tef1, and atp6 for 50 taxa, and public sequence data from the rpb2 locus for 165 taxa. Data sets were analysed individually and combined using Maximum Parsimony, Maximum Likelihood, and Bayesian Phylogenetic Inference methods. All analyses supported the monophyly of the family Ceratobasidiaceae, which comprises the genera Ceratobasidium and Thanatephorus. Multi-locus analysis revealed 10 well-supported monophyletic groups that were consistent with previous separation into anastomosis groups based on hyphal fusion criteria. This analysis coupled with analyses of a larger sample of 165 rpb2 sequences of fungi in the Cantharellales supported a sister relationship between the Botryobasidiaceae and Ceratobasidiaceae and a sister relationship of the Tulasnellaceae with the rest of the Cantharellales. The inclusion of additional sequence data did not clarify incongruences observed in previous studies of Rhizoctonia fungi in the Cantharellales based on analyses of a single or multiple genes. The diversity of ecological and morphological characters associated with these fungi requires further investigation on character evolution for re-evaluating homologous and homoplasious characters.

摘要

利用50个分类单元的核糖体DNA簇区域ITS-LSU、rpb2、tef1和atp6部分的序列数据,以及165个分类单元rpb2基因座的公共序列数据,研究了鸡油菌目内丝核菌属真菌的系统发育关系。对数据集进行单独分析,并使用最大简约法、最大似然法和贝叶斯系统发育推断方法进行合并分析。所有分析均支持角担菌科的单系性,该科包括角担菌属和丝核菌属。多位点分析揭示了10个得到充分支持的单系类群,这些类群与先前基于菌丝融合标准分为不同融合群的结果一致。该分析与对鸡油菌目中165个真菌rpb2序列的更大样本的分析相结合,支持了葡萄座腔菌科与角担菌科之间的姐妹关系,以及胶膜菌科与鸡油菌目其他类群之间的姐妹关系。纳入更多序列数据并未澄清先前基于单基因或多基因分析对鸡油菌目中丝核菌属真菌的研究所观察到的不一致性。与这些真菌相关的生态和形态特征的多样性需要进一步研究特征进化,以重新评估同源和同形特征。

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本文引用的文献

1
Characterization and Pathogenicity of Thanatephorus cucumeris from Sugar Beet in Minnesota.
Plant Dis. 1997 Mar;81(3):245-249. doi: 10.1094/PDIS.1997.81.3.245.
6
Computing the Internode Certainty and Related Measures from Partial Gene Trees.
Mol Biol Evol. 2016 Jun;33(6):1606-17. doi: 10.1093/molbev/msw040. Epub 2016 Feb 25.
9
Draft Genome Sequence of the Plant-Pathogenic Soil Fungus Rhizoctonia solani Anastomosis Group 3 Strain Rhs1AP.
Genome Announc. 2014 Oct 30;2(5):e01072-14. doi: 10.1128/genomeA.01072-14.
10
Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts.
PLoS One. 2014 Oct 22;9(10):e111011. doi: 10.1371/journal.pone.0111011. eCollection 2014.

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