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从英国饲料玉米中分离出的镰刀菌种类的多样性以及玉米和小麦中禾谷镰刀菌的种群结构。

Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat.

作者信息

Basler Ryan

机构信息

UMR BIOGER, INRA , Thiverval-Grignon , France.

出版信息

PeerJ. 2016 Jun 21;4:e2143. doi: 10.7717/peerj.2143. eCollection 2016.

Abstract

Pre-harvest contamination of forage maize by mycotoxin producing Fusarium species was investigated in the UK in 2011 and 2012. A total of 15 Fusarium species were identified from a collection of 1,761 Fusarium isolates recovered from maize stalks and kernels. This study characterized the diversity of Fusarium species present in forage maize in the UK. The predominant species detected were F. graminearum (32.9%) and F. culmorum (34.1%). Along with those species; F. avenacem, F. cerealis, F. equiseti, F. langsethiae, F. napiforme, F. oxysporum, F. poae, F. proliferatum, F. scripi, F. solani, F. subglutinans, F. tricinctum and, F. verticillioides were occasionally isolated. The trichothecene genotypes for F. graminearum were determined to be 84.9% deoxynivalenol (DON) and 15.0% nivalenol (NIV) while F. culmorum isolates were determined to have 24.9% DON and 75.1% NIV genotypes. A Bayesian model-based clustering method with nine variable number of tandem repeat markers was used to evaluate the population genetic structure of 277 F. graminearum isolates from the maize and wheat in the UK. There were three genetic clusters detected which were DON in maize, NIV in maize and DON in wheat. There were high admixture probabilities for 14.1% of the isolates in the populations. In conclusion, increased maize production in the UK and the high admixture rates in a significant portion of F. graminearum populations in maize and wheat will contribute to a new pathogen population which will further complicate breeding strategies for tolerance or resistance to this pathogen in both crops.

摘要

2011年和2012年,英国对产毒素镰刀菌属在收获前对饲用玉米的污染情况进行了调查。从1761份从玉米秸秆和籽粒中分离得到的镰刀菌分离株中,共鉴定出15种镰刀菌。本研究对英国饲用玉米中存在的镰刀菌种类的多样性进行了表征。检测到的优势种为禾谷镰刀菌(32.9%)和黄色镰刀菌(34.1%)。除了这些种类外,燕麦镰刀菌、谷类镰刀菌、木贼镰刀菌、兰氏镰刀菌、芜菁镰刀菌、尖孢镰刀菌、梨孢镰刀菌、层出镰刀菌、禾本科镰刀菌、茄病镰刀菌、亚粘团镰刀菌、三线镰刀菌和轮枝镰刀菌偶尔也有分离到。禾谷镰刀菌的单端孢霉烯基因型被确定为84.9%脱氧雪腐镰刀菌烯醇(DON)和15.0%雪腐镰刀菌烯醇(NIV),而黄色镰刀菌分离株被确定具有24.9%DON和75.1%NIV基因型。使用基于贝叶斯模型的具有9个可变串联重复标记的聚类方法,对来自英国玉米和小麦的277株禾谷镰刀菌分离株的群体遗传结构进行了评估。检测到三个遗传簇,分别是玉米中的DON、玉米中的NIV和小麦中的DON。群体中14.1%的分离株具有较高的混合概率。总之,英国玉米产量的增加以及玉米和小麦中相当一部分禾谷镰刀菌群体的高混合率,将导致一个新的病原菌群体,这将进一步使这两种作物对该病原菌的耐受性或抗性育种策略复杂化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8bca/4924121/6e4c82f52c2f/peerj-04-2143-g001.jpg

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