Yague-Sanz Carlo, Vázquez Enrique, Sánchez Mar, Antequera Francisco, Hermand Damien
URPHYM-GEMO, Namur Research College (NARC), The University of Namur, 5000, Namur, Belgium.
Instituto de Biología Funcional y Genómica, Consejo Superior de Investigaciones Científicas (CSIC)/Universidad de Salamanca, Campus Miguel de Unamuno, 37007, Salamanca, Spain.
Curr Genet. 2017 May;63(2):187-193. doi: 10.1007/s00294-016-0642-y. Epub 2016 Aug 24.
The occupancy of nucleosomes governs access to the eukaryotic genomes and results from a combination of biophysical features and the effect of ATP-dependent remodelling complexes. Most promoter regions show a conserved pattern characterized by a nucleosome-depleted region (NDR) flanked by nucleosomal arrays. The conserved RSC remodeler was reported to be critical to establish NDR in vivo in budding yeast but other evidences suggested that this activity may not be conserved in fission yeast. By reanalysing and expanding previously published data, we propose that NDR formation requires, at least partially, RSC in both yeast species. We also discuss the most prominent biological role of RSC and the possibility that non-essential subunits do not define alternate versions of the complex.
核小体的占据情况决定了对真核生物基因组的访问,它是生物物理特征与ATP依赖的重塑复合物作用相结合的结果。大多数启动子区域呈现出一种保守模式,其特征是由核小体阵列侧翼的核小体缺失区域(NDR)组成。据报道,保守的RSC重塑因子对于在体内建立出芽酵母中的NDR至关重要,但其他证据表明这种活性在裂殖酵母中可能不保守。通过重新分析和扩展先前发表的数据,我们提出,在这两种酵母中,NDR的形成至少部分需要RSC。我们还讨论了RSC最显著的生物学作用以及非必需亚基不定义该复合物替代版本的可能性。