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中国一株新型重组鸭圆环病毒的基因组序列

Genome Sequences of a Novel Recombinant Duck Circovirus in China.

作者信息

Sun Wenchao, Zheng Min, Cao Huihui, Lu Huijun, Wei Xiankai, Pan Yi, Zhang Hongyun, Su Jiaoxiu, Li Jun, Jin Ningyi

机构信息

College of Animal Science and Technology, Guangxi University, Nanning, People's Republic of China.

Institute of Military Veterinary, The Academy of Military Medical Sciences, Changchun, People's Republic of China.

出版信息

Genome Announc. 2016 Oct 20;4(5):e01181-16. doi: 10.1128/genomeA.01181-16.

DOI:10.1128/genomeA.01181-16
PMID:27795286
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5073273/
Abstract

In this study, YN26/2013, a novel recombinant duck circovirus (DuCV), was isolated from a Muscovy duck in Yunnan Province, southern China. The whole genome of YN26/2013 consists of 1,987 nucleotides (nt), the same genomic size as that of the DuCV-2 genotype. However, YN26/2013 shares 91.5 to 94.3% nucleotide identity similarity with previously reported type I (DuCV-1) viruses. Importantly, a novel putative recombinant event between DuCV-1 and DuCV-2 was identified as occurring within the 987- to 1111-nt region of the YN26/2013 genome.

摘要

在本研究中,新型重组鸭圆环病毒(DuCV)YN26/2013从中国南方云南省的一只番鸭中分离得到。YN26/2013的全基因组由1987个核苷酸(nt)组成,与DuCV - 2基因型的基因组大小相同。然而,YN26/2013与先前报道的I型(DuCV - 1)病毒的核苷酸同一性相似度为91.5%至94.3%。重要的是,在YN26/2013基因组的987至1111 nt区域内鉴定出DuCV - 1和DuCV - 2之间发生了一次新的推定重组事件。

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本文引用的文献

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Genetic analysis of duck circovirus in Pekin ducks from South Korea.韩国北京鸭鸭圆环病毒的遗传分析。
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Identification, genotyping, and molecular evolution analysis of duck circovirus.鸭圆环病毒的鉴定、基因分型及分子进化分析。
Gene. 2013 Oct 25;529(2):288-95. doi: 10.1016/j.gene.2013.07.028. Epub 2013 Aug 6.
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Diagnosis of duck circovirus infections by conventional and real-time polymerase chain reaction tests.通过传统和实时聚合酶链反应检测诊断鸭圆环病毒感染
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Cloning and sequencing of Duck circovirus (DuCV).鸭圆环病毒(DuCV)的克隆与测序
Arch Virol. 2003 Dec;148(12):2471-80. doi: 10.1007/s00705-003-0181-y. Epub 2003 Sep 16.