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用于肠杆菌科细菌中碳青霉烯酶产生表型检测的改良碳青霉烯灭活方法

Modified Carbapenem Inactivation Method for Phenotypic Detection of Carbapenemase Production among Enterobacteriaceae.

作者信息

Pierce Virginia M, Simner Patricia J, Lonsway David R, Roe-Carpenter Darcie E, Johnson J Kristie, Brasso William B, Bobenchik April M, Lockett Zabrina C, Charnot-Katsikas Angella, Ferraro Mary Jane, Thomson Richard B, Jenkins Stephen G, Limbago Brandi M, Das Sanchita

机构信息

Department of Pathology, Massachusetts General Hospital, Boston, Massachusetts, USA

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, Maryland, USA.

出版信息

J Clin Microbiol. 2017 Aug;55(8):2321-2333. doi: 10.1128/JCM.00193-17. Epub 2017 Apr 5.

Abstract

The ability of clinical microbiology laboratories to reliably detect carbapenemase-producing carbapenem-resistant (CP-CRE) is an important element of the effort to prevent and contain the spread of these pathogens and an integral part of antimicrobial stewardship. All existing methods have limitations. A new, straightforward, inexpensive, and specific phenotypic method for the detection of carbapenemase production, the carbapenem inactivation method (CIM), was recently described. Here we describe a two-stage evaluation of a modified carbapenem inactivation method (mCIM), in which tryptic soy broth was substituted for water during the inactivation step and the length of this incubation was extended. A validation study was performed in a single clinical laboratory to determine the accuracy of the mCIM, followed by a nine-laboratory study to verify the reproducibility of these results and define the zone size cutoff that best discriminated between CP-CRE and members of the family that do not produce carbapenemases. Bacterial isolates previously characterized through whole-genome sequencing or targeted PCR as to the presence or absence of carbapenemase genes were tested for carbapenemase production using the mCIM; isolates with Ambler class A, B, and D carbapenemases, non-CP-CRE isolates, and carbapenem-susceptible isolates were included. The sensitivity of the mCIM observed in the validation study was 99% (95% confidence interval [95% CI], 93% to 100%), and the specificity was 100% (95% CI, 82% to 100%). In the second stage of the study, the range of sensitivities observed across nine laboratories was 93% to 100%, with a mean of 97%; the range of specificities was 97% to 100%, with a mean of 99%. The mCIM was easy to perform and interpret for , with results in less than 24 h and excellent reproducibility across laboratories.

摘要

临床微生物实验室可靠检测产碳青霉烯酶的耐碳青霉烯类肠杆菌科细菌(CP-CRE)的能力,是预防和控制这些病原体传播工作的重要组成部分,也是抗菌药物管理的一个不可或缺的部分。所有现有方法都有局限性。最近描述了一种用于检测碳青霉烯酶产生的新的、直接、廉价且特异的表型方法,即碳青霉烯灭活法(CIM)。在此,我们描述了一种改良碳青霉烯灭活法(mCIM)的两阶段评估,其中在灭活步骤中用胰蛋白胨大豆肉汤代替水,并延长该孵育时间。在单个临床实验室进行了一项验证研究,以确定mCIM的准确性,随后进行了一项九实验室研究,以验证这些结果的可重复性,并确定能最佳区分CP-CRE和不产生碳青霉烯酶的肠杆菌科细菌成员的抑菌圈大小临界值。使用mCIM对先前通过全基因组测序或靶向PCR鉴定是否存在碳青霉烯酶基因的细菌分离株进行碳青霉烯酶产生检测;包括具有安布勒A、B和D类碳青霉烯酶的分离株、非CP-CRE分离株和碳青霉烯敏感分离株。在验证研究中观察到的mCIM的敏感性为99%(95%置信区间[95%CI],93%至100%),特异性为100%(95%CI,8 — 2%至100%)。在研究的第二阶段,九个实验室观察到的敏感性范围为93%至100%,平均为97%;特异性范围为97%至100%,平均为99%。mCIM易于操作和解释,结果在不到24小时内得出,且在各实验室间具有出色的可重复性。

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