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从水微宇宙中分离出的LMG 29738的基因组序列。

Genome Sequence of LMG 29738, Isolated from a Water Microcosm.

作者信息

Aurass Philipp, Karste Susanne, Trost Eva, Glaeser Stefanie P, Kämpfer Peter, Flieger Antje

机构信息

Division of Enteropathogenic Bacteria and Legionella (FG11), Robert Koch-Institut, Wernigerode, Germany

Division of Enteropathogenic Bacteria and Legionella (FG11), Robert Koch-Institut, Wernigerode, Germany.

出版信息

Genome Announc. 2017 Jun 8;5(23):e00487-17. doi: 10.1128/genomeA.00487-17.

DOI:10.1128/genomeA.00487-17
PMID:28596405
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5465624/
Abstract

We announce here the complete genome sequence of LMG 29738, which we recently isolated from a contaminated water microcosm. The genome consists of a 2.94-Mb chromosome and a 94-kb plasmid. To our knowledge, we provide the first DNA methylation analysis of a species.

摘要

我们在此公布LMG 29738的完整基因组序列,该菌株是我们最近从一个受污染的水微观世界中分离出来的。其基因组由一条2.94兆碱基对的染色体和一个94千碱基对的质粒组成。据我们所知,我们首次对一个物种进行了DNA甲基化分析。

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本文引用的文献

1
Paracoccus contaminans sp. nov., isolated from a contaminated water microcosm.污染副球菌新种,从受污染的水微宇宙中分离得到。
Int J Syst Evol Microbiol. 2016 Dec;66(12):5101-5105. doi: 10.1099/ijsem.0.001478. Epub 2016 Sep 5.
2
antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters.antiSMASH 3.0——用于生物合成基因簇基因组挖掘的综合资源。
Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
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Genome of a novel isolate of Paracoccus denitrificans capable of degrading N,N-dimethylformamide.一种新型 Paracoccus denitrificans 菌株的基因组,该菌株能够降解 N,N-二甲基甲酰胺。
J Bacteriol. 2011 Oct;193(19):5598-9. doi: 10.1128/JB.05667-11.
4
Paracoccus yeei: a new unusual opportunistic bacterium in ambulatory peritoneal dialysis.海栖假单胞菌:一种新的不常见的机会致病菌,与门诊腹膜透析相关。
Int J Infect Dis. 2010 Feb;14(2):e173-4. doi: 10.1016/j.ijid.2009.03.030. Epub 2009 Jun 24.
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The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
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First comprehensively documented case of Paracoccus yeei infection in a human.人类感染耶氏副球菌的首例全面记录病例。
J Clin Microbiol. 2004 Jul;42(7):3366-8. doi: 10.1128/JCM.42.7.3366-3368.2004.
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Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes.在有氧-厌氧变化期间,反硝化副球菌在连续培养中的反硝化活性动态。
J Bacteriol. 1996 Aug;178(15):4367-74. doi: 10.1128/jb.178.15.4367-4374.1996.
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