Karwautz Clemens, Kus Günter, Stöckl Michael, Neu Thomas R, Lueders Tillmann
Institute of Groundwater Ecology, Helmholtz Zentrum München - German Research Centre for Environmental Health, Neuherberg, Germany.
Bavarian Environment Agency (LfU), Department 10: Geological Survey, Hof/Saale, Germany.
ISME J. 2018 Jan;12(1):87-100. doi: 10.1038/ismej.2017.146. Epub 2017 Sep 26.
Massive biofilms have been discovered in the cave of an iodine-rich former medicinal spring in southern Germany. The biofilms completely cover the walls and ceilings of the cave, giving rise to speculations about their metabolism. Here we report on first insights into the structure and function of the biofilm microbiota, combining geochemical, imaging and molecular analytics. Stable isotope analysis indicated that thermogenic methane emerging into the cave served as an important driver of biofilm formation. The undisturbed cavern atmosphere contained up to 3000 p.p.m. methane and was microoxic. A high abundance and diversity of aerobic methanotrophs primarily within the Methylococcales (Gammaproteobacteria) and methylotrophic Methylophilaceae (Betaproteobacteria) were found in the biofilms, along with a surprising diversity of associated heterotrophic bacteria. The highest methane oxidation potentials were measured for submerged biofilms on the cavern wall. Highly organized globular structures of the biofilm matrix were revealed by fluorescent lectin staining. We propose that the extracellular matrix served not only as an electron sink for nutrient-limited biofilm methylotrophs but potentially also as a diffusive barrier against volatilized iodine species. Possible links between carbon and iodine cycling in this peculiar habitat are discussed.
在德国南部一个曾经富含碘的药用温泉洞穴中发现了大量生物膜。这些生物膜完全覆盖了洞穴的墙壁和天花板,引发了人们对其新陈代谢的猜测。在此,我们结合地球化学、成像和分子分析方法,首次报告了对生物膜微生物群结构和功能的见解。稳定同位素分析表明,进入洞穴的热成因甲烷是生物膜形成的重要驱动力。未受干扰的洞穴大气中甲烷含量高达3000 ppm,且为微氧环境。在生物膜中发现了大量且多样的好氧甲烷氧化菌,主要存在于甲基球菌目(γ-变形菌纲)和甲基营养型嗜甲基菌科(β-变形菌纲)中,同时还伴有令人惊讶的多样相关异养细菌。洞穴壁上的浸没生物膜测得的甲烷氧化潜力最高。通过荧光凝集素染色揭示了生物膜基质高度有序的球状结构。我们认为,细胞外基质不仅作为营养受限的生物膜甲基营养菌的电子受体,还可能作为对挥发性碘物种的扩散屏障。本文讨论了这个特殊栖息地中碳和碘循环之间的可能联系。