SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA.
Nucleic Acids Res. 2018 Jan 4;46(D1):D633-D639. doi: 10.1093/nar/gkx935.
MetaCyc (https://MetaCyc.org) is a comprehensive reference database of metabolic pathways and enzymes from all domains of life. It contains more than 2570 pathways derived from >54 000 publications, making it the largest curated collection of metabolic pathways. The data in MetaCyc is strictly evidence-based and richly curated, resulting in an encyclopedic reference tool for metabolism. MetaCyc is also used as a knowledge base for generating thousands of organism-specific Pathway/Genome Databases (PGDBs), which are available in the BioCyc (https://BioCyc.org) and other PGDB collections. This article provides an update on the developments in MetaCyc during the past two years, including the expansion of data and addition of new features.
MetaCyc(https://MetaCyc.org)是一个综合的代谢途径和酶的参考数据库,涵盖了所有生命领域。它包含了超过 2570 条途径,来源于超过 54000 篇文献,是最大的经过精心整理的代谢途径集合。MetaCyc 中的数据是严格基于证据的,并且经过了精心整理,因此成为了代谢领域的百科全书式参考工具。MetaCyc 也被用作生成数千个特定于生物体的途径/基因组数据库(PGDB)的知识库,这些数据库可在 BioCyc(https://BioCyc.org)和其他 PGDB 集合中获得。本文提供了过去两年中 MetaCyc 的发展情况更新,包括数据的扩展和新功能的增加。