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不同年龄组泰国男性面部皮肤细菌群落的多样性

Diversity of bacterial communities on the facial skin of different age-group Thai males.

作者信息

Wilantho Alisa, Deekaew Pamornya, Srisuttiyakorn Chutika, Tongsima Sissades, Somboonna Naraporn

机构信息

Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Pathum Thani, Thailand.

Department of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.

出版信息

PeerJ. 2017 Nov 21;5:e4084. doi: 10.7717/peerj.4084. eCollection 2017.

Abstract

BACKGROUND

Skin microbiome varies from person to person due to a combination of various factors, including age, biogeography, sex, cosmetics and genetics. Many skin disorders appear to be related to the resident microflora, yet databases of facial skin microbiome of many biogeographies, including Thai, are limited.

METHODS

Metagenomics derived B-RISA and 16S rRNA gene sequencing was utilized to identify the culture-independent bacterial diversity on Thai male faces (cheek and forehead areas). Skin samples were categorized (grouped) into (i) normal () and (ii) acne-prone () young adults, and normal (iii) middle-aged () and (iv) elderly () adults.

RESULTS

The 16S rRNA gene sequencing was successful as the sequencing depth had an estimated >98% genus coverage of the true community. The major diversity was found between the young and elderly adults in both cheek and forehead areas, followed by that between normal and acne young adults. Detection of representative characteristics indicated that bacteria from the order Rhizobiales, genera and , distinguished the microbiota, along the clinical features of wrinkles and pores. Prediction of the metabolic potential revealed reduced metabolic pathways involved in replication and repair, nucleotide metabolism and genetic translation in the compared with that in the . For young adults, some unique compositions such as abundance of and , with a minor diversity between normal and acne skins, were detected. The metabolic potentials of the acne vs. normal young adults showed that was low in many cellular processes (e.g., cell motility and environmental adaptation), but high in carbohydrate metabolism, which could support acne growth. Moreover, comparison with the age-matched males from the US (Boulder, Colorado) to gain insight into the diversity across national biogeography, revealed differences in the distribution pattern of species, although common bacteria were present in both biogeographical samples. Furthermore, B-RISA served as a crosscheck result to the 16S rRNA gene sequencing (i.e., differences between teenage and elderly microbiota).

CONCLUSIONS

This study revealed and compared the microbial diversity on different aged Thai male faces, and included analyses for representing the bacterial flora, the clinical skin characteristics, and comparison with the US age-matched. The results represent the first skin microbiota of Thai males, and helps the design of a large-scale skin microbiome study of Thais. The findings of the diversity among ages, skin type and national biogeography supported the importance of these traits in the skin microbiome and in developing a safe and sustainable treatment for acne and aging skin diseases.

摘要

背景

由于年龄、生物地理学、性别、化妆品和遗传学等多种因素的综合作用,皮肤微生物群因人而异。许多皮肤疾病似乎与常驻微生物群有关,然而,包括泰国人在内的许多生物地理学区域的面部皮肤微生物群数据库却很有限。

方法

利用宏基因组学衍生的B-RISA和16S rRNA基因测序来鉴定泰国男性面部(脸颊和额头区域)不依赖培养的细菌多样性。皮肤样本被分类(分组)为:(i)正常()和(ii)易长痤疮()的年轻成年人,以及正常(iii)中年()和(iv)老年()成年人。

结果

16S rRNA基因测序成功,因为测序深度估计对真实群落的属覆盖率>98%。在脸颊和额头区域,年轻人和老年人之间的多样性最大,其次是正常和易长痤疮的年轻人之间的多样性。代表性特征检测表明,根瘤菌目、属和属的细菌,根据皱纹和毛孔的临床特征,区分了微生物群。代谢潜力预测显示,与相比,在复制和修复、核苷酸代谢和基因翻译中涉及的代谢途径减少。对于年轻人,检测到一些独特的组成,如和的丰度,正常皮肤和痤疮皮肤之间的多样性较小。痤疮与正常年轻人的代谢潜力表明,在许多细胞过程(如细胞运动和环境适应)中较低,但在碳水化合物代谢中较高,这可能支持痤疮生长。此外,与来自美国(科罗拉多州博尔德)的年龄匹配男性进行比较,以深入了解不同国家生物地理学的多样性,结果显示物种分布模式存在差异,尽管两个生物地理学样本中都存在常见细菌。此外,B-RISA作为16S rRNA基因测序的交叉核对结果(即青少年和老年微生物群之间的差异)。

结论

本研究揭示并比较了不同年龄泰国男性面部的微生物多样性,包括对细菌菌群、临床皮肤特征的分析,以及与美国年龄匹配者的比较。结果代表了泰国男性的首个皮肤微生物群,并有助于设计一项大规模的泰国人皮肤微生物群研究。年龄、皮肤类型和国家生物地理学之间多样性的发现支持了这些特征在皮肤微生物群以及开发痤疮和衰老性皮肤病安全可持续治疗方法中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ebe/5701550/8af577f54864/peerj-05-4084-g001.jpg

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